Escherichia coli S40 |
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Putative Escherichia coli S40 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 5,399,183 bp
GenBank #: CP010235
REBASE acronym: EcoS40
Org_num: 21969
All begin RG69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24340 | 62 aa hypothetical protein | |||
| 24345 | M | M.EcoP231ORF1540P (100% identity) | RTCANNNNNNCTC | M.EcoS40ORF24345P |
| 24350 | S | S.EcoSCU103ORF3030P (100% identity) | RTCANNNNNNCTC | S.EcoS40ORF24345P |
| 24355 | R | EcoP231ORF1540P (99% identity) | RTCANNNNNNCTC | EcoS40ORF24345P |
| 24365 | alcohol dehydrogenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2505 | cell division protein DamX | |||
| 2510 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS40DamP |
| 2515 | ribulose-phosphate 3-epimerase | |||
| 3080 | 59 aa hypothetical protein | |||
| 3085 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoS40ORF20655P |
| 3090 | Fis family transcriptional regulator | |||
| 9785 | hydrolase | |||
| 9790 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoS40Dcm2P |
| 9795 | V | V.SsoSE61DcmP (100% identity) | V.EcoS40Dcm2P | |
| 9800 | multidrug DMT transporter | |||
| 10795 | multidrug DMT transporter | |||
| 10800 | V | V.SsoSE61DcmP (100% identity) | V.EcoS40DcmP | |
| 10805 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoS40DcmP |
| 10810 | hydrolase | |||
| 16320 | endonuclease | |||
| 16325 | M | M.EcoP231ORF16060P (100% identity) | GATC | M.EcoS40ORF16325P |
| 16330 | 75 aa hypothetical protein | |||
| 18165 | cruciferin | |||
| 18170 | M | M.Sbo812ORFAP (100% identity) | GATC | M.EcoS40ORF18170P |
| 18175 | 27 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24315 | restriction endonuclease | |||
| 24320 | R | EcoZ151McrCP (100% identity) | EcoS40McrCP | |
| 24325 | R | SflSTLE4McrBP (100% identity) | EcoS40McrBP | |
| 24330 | transposase | |||