Donghicola species KarMa |
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Putative Donghicola species KarMa RM systems
Ref: Wibberg,D. unpublished
REBASE ref # 17754
Contig set: 4,212,842 bp
GenBank #: FMJB00000000 (NZ_FMJB00000000)
REBASE acronym: DspMa
Org_num: 21983
All begin KARMA_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2963 | 575 aa hypothetical protein | |||
| 2964 | M | M.Ssp107133II (94% identity) | M.DspMaORF2964P | |
| 2965 | S | S.BspMP1ORF30670P (40% identity) | S.DspMaORF2964P | |
| 2966 | 379 aa hypothetical protein | |||
| 2967 | 174 aa hypothetical protein | |||
| 2968 | R | Ssp107133IIP (93% identity) | DspMaORF2964P | |
| 2969 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5 | membrane protein | |||
| 6 | M | PpiP13ORF1820P (62% identity) | M.DspMaORF6P | |
| 7 | ATP-dependent helicase YeeB | |||
| 3447 | membrane protein | |||
| 3448 | M | M.Ssp609ORF15200P (82% identity) | GANTC | M.DspMaORF3448P |
| 3449 | 198 aa hypothetical protein | |||
| 3672 | 48 aa hypothetical protein | |||
| 3673 | R | 175 aa hypothetical protein | CAGCTG | R1.DspMaORF3676P |
| 3674 | R | PcoRK1ORF11065P (61% identity) | CAGCTG | R2.DspMaORF3676P |
| 3675 | C | C.PcoRK1ORF11065P (48% identity) | C.DspMaORF3676P | |
| 3676 | M | M.PcoRK1ORF11065P (73% identity) | CAGCTG | M.DspMaORF3676P |
| 3677 | 271 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2538 | 143 aa hypothetical protein | |||
| 2539 | R | PinP92IIP (74% identity) | DspMaORF2540P | |
| 2540 | M | M.Pae19484aORF11755P (60% identity) | M.DspMaORF2540P | |
| 2541 | 612 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 125 | 142 aa hypothetical protein | |||
| 126 | R | Msp401McrBP (86% identity) | DspMaMcrBP | |
| 127 | R | RspA2McrCP (73% identity) | DspMaMcrCP | |
| 128 | 371 aa hypothetical protein | |||