Serratia marcescens isolate SM1978 |
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Putative Serratia marcescens isolate SM1978 RM systems
Ref: Yao,Y. unpublished
REBASE ref # 23425
| Sequence length: | GenBank #: | |
| Chromosome: | (contig set) | FNXW00000000 |
| Chromosome: | (contig set) | FNXV00000000 |
REBASE acronym: Sma1890
Org_num: 22057
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1 | S | S.SmaWVU3ORF2490P (47% identity) | S.Sma1978ORFGP | |
| 3 | M | M.Sma1890ORFKP (100% identity) | M.Sma1978ORFGP | |
| 8 | R | Sma1890ORFKP (100% identity) | Sma1978ORFGP | |
| 16 | 91 aa hypothetical protein | |||
| 8 | 120 aa hypothetical protein | |||
| 10 | R | Sma1890ORFIP (100% identity) | ACGNNNNNGTTG | Sma1978ORFBP |
| 17 | 115 aa hypothetical protein | |||
| 18 | Histidinol phosphatase | |||
| 19 | 183 aa hypothetical protein | |||
| 20 | 110 aa hypothetical protein | |||
| 21 | 257 aa hypothetical protein | |||
| 22 | 139 aa hypothetical protein | |||
| 23 | ATP-dependent DNA helicase RecG | |||
| 24 | 136 aa hypothetical protein | |||
| 26 | S | S.Sma1890ORFIP (100% identity) | ACGNNNNNGTTG | S.Sma1978ORFBP |
| 28 | Anticodon nuclease | |||
| 29 | 153 aa hypothetical protein | |||
| 30 | M | M.Sma1890ORFIP (100% identity) | ACGNNNNNGTTG | M.Sma1978ORFBP |
| 32 | Uncharacterized protein | |||
| Chromosome | ||||
| 2 | Uncharacterized protein | |||
| 3 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.Sma1890ORFIP |
| 5 | Anticodon nuclease | |||
| 6 | 153 aa hypothetical protein | |||
| 7 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.Sma1890ORFIP |
| 10 | ATP-dependent DNA helicase RecG | |||
| 11 | 136 aa hypothetical protein | |||
| 12 | Histidinol phosphatase | |||
| 13 | 139 aa hypothetical protein | |||
| 14 | 257 aa hypothetical protein | |||
| 15 | 110 aa hypothetical protein | |||
| 16 | 183 aa hypothetical protein | |||
| 17 | 115 aa hypothetical protein | |||
| 20 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | Sma1890ORFIP |
| 26 | 120 aa hypothetical protein | |||
| 360 | 91 aa hypothetical protein | |||
| 361 | R | Sma1978ORFGP (100% identity) | Sma1890ORFKP | |
| 369 | M | M.Sma1978ORFGP (100% identity) | M.Sma1890ORFKP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | Uncharacterized protein | |||
| 11 | M | M.Ssp15303ORFDP (100% identity) | M.Sma1978ORFKP | |
| 12 | 67 aa hypothetical protein | |||
| 18 | Uncharacterized protein | |||
| 20 | M | M.Ssp15303DcmP (100% identity) | M.Sma1978DcmP | |
| 23 | Uncharacterized protein | |||
| 48 | 102 aa hypothetical protein | |||
| 50 | M | M.Sma1890ORFFP (100% identity) | M.Sma1978ORFDP | |
| 52 | Uncharacterised protein | |||
| 68 | DNA-binding protein | |||
| 69 | M | M.Ssp15303ORFEP (100% identity) | GATC | M2.Sma1978ORFIP |
| 70 | Uncharacterised protein | |||
| 143 | 104 aa hypothetical protein | |||
| 146 | M | M.Sma1890ORFHP (100% identity) | M.Sma1978ORFCP | |
| 148 | Phage protein | |||
| 185 | 69 aa hypothetical protein | |||
| 187 | RM | Sma1890ORFLP (100% identity) | Sma1978ORFHP | |
| 188 | Restriction/modification system DNA helicase | |||
| 222 | Uncharacterized protein | |||
| 223 | M | M.Sma1890ORFGP (100% identity) | M.Sma1978ORFAP | |
| 226 | Uncharacterized protein | |||
| Chromosome | ||||
| 18 | Uncharacterized protein | |||
| 20 | M | M.Ssp15303DcmP (100% identity) | M.Sma1890DcmP | |
| 23 | Uncharacterized protein | |||
| 35 | 69 aa hypothetical protein | |||
| 37 | RM | Sma1978ORFHP (100% identity) | Sma1890ORFLP | |
| 38 | Restriction/modification system DNA helicase | |||
| 28 | Uncharacterised protein | |||
| 29 | M | M.Ssp15303ORFEP (100% identity) | GATC | M.Sma1890ORFCP |
| 30 | DNA-binding protein | |||
| 62 | 102 aa hypothetical protein | |||
| 64 | M | M.Sma1978ORFDP (100% identity) | M.Sma1890ORFFP | |
| 66 | Uncharacterised protein | |||
| 86 | 67 aa hypothetical protein | |||
| 87 | M | M.Ssp15303ORFDP (100% identity) | M.Sma1890ORFAP | |
| 88 | Uncharacterized protein | |||
| 189 | Uncharacterized protein | |||
| 190 | M | M.Sma1978ORFAP (100% identity) | M.Sma1890ORFGP | |
| 193 | Uncharacterized protein | |||
| 360 | Phage protein | |||
| 363 | M | M.Sma1978ORFCP (100% identity) | M.Sma1890ORFHP | |
| 366 | 104 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33 | Uncharacterized protein YagK | |||
| 35 | R | Sma1890ORFEP (100% identity) | Sma1978ORFFP | |
| 42 | Type III restriction-modification system methylation subunit | |||
| Chromosome | ||||
| 28 | Type III restriction-modification system methylation subunit | |||
| 29 | R | Sma1978ORFFP (100% identity) | Sma1890ORFEP | |
| 36 | Uncharacterized protein YagK | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 49 | 139 aa hypothetical protein | |||
| 50 | M | M.SspNIH1Dam (100% identity) | GATC | M.Sma1978ORFEP |
| 54 | Ribulose-phosphate 3-epimerase | |||
| Chromosome | ||||
| 197 | Ribulose-phosphate 3-epimerase | |||
| 202 | M | M.SspNIH1Dam (100% identity) | GATC | M.Sma1890ORFJP |
| 204 | 139 aa hypothetical protein | |||