Escherichia coli 272 |
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Putative Escherichia coli 272 RM systems
Ref: Shaaban,S. et al. unpublished
REBASE ref # 23582
| Sequence length: | GenBank #: | |
| Chromosome: | 5,474,193 bp | CP018239 |
| plasmid pO157: | 94,170 bp | CP018240 |
REBASE acronym: Eco272
Org_num: 21913
All begin BFL22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29295 | 113 aa hypothetical protein | |||
| 29300 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco272ORF29305P |
| 29305 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco272ORF29305P |
| 29310 | R | EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | Eco272ORF29305P |
| 29315 | 94 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9250 | TrmB family transcriptional regulator | |||
| 9255 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco272ORF9255P | |
| 9270 | 61 aa hypothetical protein | |||
| 13910 | drug/metabolite exporter YedA | |||
| 13915 | V | V.EcosPA8DcmP (100% identity) | V.Eco272DcmP | |
| 13920 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco272DcmP |
| 13925 | phosphohydrolase | |||
| 17405 | LexA family transcriptional repressor | |||
| 17410 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco272ORF17410P |
| 17415 | R | Sso1099IP (100% identity) | CTGCAG | Eco272ORF17410P |
| 17420 | 215 aa hypothetical protein | |||
| 17545 | regulator | |||
| 17550 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco272ORF17550P |
| 17555 | 70 aa hypothetical protein | |||
| 22615 | Fis family transcriptional regulator | |||
| 22620 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco272ORF22620P |
| 22625 | DUF2556 domain-containing protein | |||
| 23170 | ribulose-phosphate 3-epimerase | |||
| 23175 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco272DamP |
| 23180 | cell division protein DamX | |||
| 27590 | 65 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco272ORF27595P | |
| 27605 | Eae protein | |||
| 29015 | helicase | |||
| 29020 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco272ORF29020P |
| plasmid pO157 | ||||
| 29840 | arginase | |||
| 29845 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco272ORF29845P | |
| 29850 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 29285 | 293 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco272GmrDP | |
| 29295 | 113 aa hypothetical protein | |||