Streptococcus parauberis SP-llh |
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Putative Streptococcus parauberis SP-llh RM systems
Ref: Liu,H.L. unpublished
REBASE ref # 23389
Contig set: 2,499,306 bp
GenBank #: MLCP00000000 (NZ_MLCP00000000)
REBASE acronym: Spa417
Org_num: 22383
All begin BI362_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11970 | 372 aa hypothetical protein | |||
| 11975 | S | S.SthN4LORF1203P (63% identity) | S.Spa417ORF11975P | |
| 11980 | 180 aa hypothetical protein | |||
| 12025 | BlaZ family class A beta-lactamase | |||
| ??? | S | S.Lla63II (61% identity) | S.Spa417ORF12030P | |
| 12035 | 191 aa hypothetical protein | |||
| 11195 | 337 aa hypothetical protein | |||
| 11200 | R | EduVIT3ORF16885P (81% identity) | Spa417ORF11205P | |
| 11205 | M | M.SeqSEZ25ORF1830P (82% identity) | M.Spa417ORF11205P | |
| 11210 | S | S3.SpaBS26ORF8030P (39% identity) | S.Spa417ORF11205P | |
| 11215 | 0 aa hypothetical protein | |||
| 5060 | resolvase | |||
| 5065 | R | LcrJM2IIP (99% identity) | Spa417ORF5095P | |
| 5070 | 498 aa hypothetical protein | |||
| 5075 | S | S3.Lla073IIP (91% identity) | S1.Spa417ORF5095P | |
| 5080 | S | S2.LgeLS4ORF5420P (41% identity) | S2.Spa417ORF5095P | |
| 5085 | integrase | |||
| 5090 | S | S.Lla109FORFDP (57% identity) | S3.Spa417ORF5095P | |
| 5095 | M | M2.LlaA12ORF1262P (99% identity) | M1.Spa417ORF5095P | |
| 5100 | 600 aa hypothetical protein | |||
| 5130 | IS6 family transposase | |||
| 5135 | S | S.Lpl8198ORFAP (62% identity) | S.Spa417ORF5140P | |
| 5140 | M | M.LlaDRC3I (99% identity) | M.Spa417ORF5140P | |
| 5145 | R | SpaF3KORF1139P (98% identity) | Spa417ORF5140P | |
| 5150 | 124 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11815 | IS6 family transposase | |||
| 11820 | RM | SpaC1AORFAP (78% identity) | Spa417ORF11820P | |
| 11825 | 139 aa hypothetical protein | |||
| 9500 | 153 aa hypothetical protein | |||
| 9505 | M | M.Sag8183ORF1584P (98% identity) | M1.Spa417ORF9505P | |
| 9510 | M | M1.SanVSI85ORF6970P (99% identity) | M2.Spa417ORF9505P | |
| 9515 | 82 aa hypothetical protein | |||
| 5755 | 142 aa hypothetical protein | |||
| 5760 | M | M.Sdy6403ORF1125P (96% identity) | M.Spa417ORF5760P | |
| 5765 | replication initiator protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11260 | site-specific integrase | |||
| 11265 | M | M.SthMM20II (60% identity) | M.Spa417ORF11265P | |
| 11270 | R | Sub4672IP (69% identity) | Spa417ORF11265P | |
| 11275 | Cro/Cl family transcriptional regulator | |||
| 11655 | 30S ribosomal protein S9 | |||
| 11660 | M | M.SmuUA140ORF177P (76% identity) | M.Spa417ORF11660P | |
| 11665 | R | Efa4239ORFEP (87% identity) | Spa417ORF11660P | |
| 11670 | 158 aa hypothetical protein | |||
| 7895 | 60 aa hypothetical protein | |||
| 7900 | M | M.EfaBE47ORF8225P (97% identity) | M.Spa417ORF7900P | |
| 7905 | R | Ehi13144ORF9405P (94% identity) | Spa417ORF7900P | |
| 7910 | 94 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11140 | 436 aa hypothetical protein | |||
| 11145 | R | Lco3167McrBP (32% identity) | Spa417McrBP | |
| 11150 | R | EspHDW6AMcrC2P (49% identity) | Spa417McrCP | |
| 11155 | 116 aa hypothetical protein | |||