Gardnerella vaginalis JCP8522 |
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Putative Gardnerella vaginalis JCP8522 RM systems
Ref: Weinstock,G. et al. unpublished
REBASE ref # 22837
Contig set: 1,470,487 bp
GenBank #: ATJE00000000 (NZ_ATJE00000000)
REBASE acronym: Gva8522
Org_num: 21784
All begin HMPREF1586_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10 | iron permease FTR1 family protein | |||
| 11 | R | Gsp257IP (99% identity) | Gva8522ORF13P | |
| 12 | S | S.Gsp257I (100% identity) | S.Gva8522ORF13P | |
| 13 | M | M.Gsp257I (99% identity) | M.Gva8522ORF13P | |
| 14 | 296 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | dCTP deaminase | |||
| 3 | M | M.GvaB513ORF3558P (100% identity) | GATC | M1.Gva8522ORF3P |
| 4 | R | GvaB513ORF3548P (100% identity) | GATC | Gva8522ORF3P |
| 5 | M | M1.Gsp1144ORF5470P (100% identity) | GATC | M2.Gva8522ORF3P |
| 6 | haloacid dehalogenase-like hydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 127 | M | M.Gsp571GIII (100% identity) | M.Gva8522ORF127P | |
| 128 | R | Gsp571GIIIP (99% identity) | Gva8522ORF127P | |
| 129 | 232 aa hypothetical protein | |||