Gardnerella vaginalis JCP8017B |
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Putative Gardnerella vaginalis JCP8017B RM systems
Ref: Weinstock,G. et al. unpublished
REBASE ref # 22837
Contig set: 1,599,351 bp
GenBank #: ATJM00000000 (NZ_ATJM00000000)
REBASE acronym: Gva8017B
Org_num: 21781
All begin HMPREF1578_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 888 | site-specific recombinase, phage integrase | |||
| 889 | S | S2.Gva8017AORF279P (100% identity) | S1.Gva8017BORF891P | |
| 890 | S | S1.Gva37ORF3240P (100% identity) | S2.Gva8017BORF891P | |
| 891 | M | M.GvaB477ORF6083P (100% identity) | M.Gva8017BORF891P | |
| 892 | toxin-antitoxin system, toxin component, HicA | |||
| 968 | 42 aa hypothetical protein | |||
| 969 | R | Gva8017AORF163P (100% identity) | Gva8017BORF971P | |
| 970 | S | S.Gva8017AORF163P (100% identity) | S.Gva8017BORF971P | |
| 971 | M | M.Gva8017AORF163P (100% identity) | M.Gva8017BORF971P | |
| 972 | 44 aa hypothetical protein | |||
| 885 | ABC transporter, substrate-binding protein | |||
| 886 | R | GvaB482ORF3726P (100% identity) | Gva8017BORF886P | |
| 887 | S | S2.GvaFY17ORF4565P (43% identity) | S.Gva8017BORF886P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 543 | phosphoglycerate mutase family protein | |||
| 544 | M | M.Gva8017AORF684P (100% identity) | GATC | M.Gva8017BORF544P |
| 546 | 46 aa hypothetical protein | |||
| 545 | R | Gva8017AORF684P (100% identity) | GATC | Gva8017BORF544P |
| 547 | divergent AAA domain protein | |||
| 1378 | 226 aa hypothetical protein | |||
| 1379 | M | M.Gva8017AORF1054P (100% identity) | M.Gva8017BORF1379P | |
| 1380 | 261 aa hypothetical protein | |||