Gardnerella vaginalis JCP8017A |
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Putative Gardnerella vaginalis JCP8017A RM systems
Ref: Weinstock,G. et al. unpublished
REBASE ref # 22837
Contig set: 1,605,521 bp
GenBank #: ATJN00000000 (NZ_ATJN00000000)
REBASE acronym: Gva8017A
Org_num: 21773
All begin HMPREF1577_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 283 | S | S2.GvaFY17ORF4565P (57% identity) | S.Gva8017AORF284P | |
| 284 | M | M.GvaB477ORF6083P (100% identity) | M.Gva8017AORF284P | |
| 285 | toxin-antitoxin system, toxin component, HicA | |||
| 162 | 44 aa hypothetical protein | |||
| 163 | M | M.Gva8017BORF971P (100% identity) | M.Gva8017AORF163P | |
| 164 | S | S.Gva8017BORF971P (100% identity) | S.Gva8017AORF163P | |
| 165 | R | Gva8017BORF971P (100% identity) | Gva8017AORF163P | |
| 166 | 42 aa hypothetical protein | |||
| 278 | ABC transporter, substrate-binding protein | |||
| 279 | R | GvaB482ORF3726P (100% identity) | Gva8017AORF279P | |
| 280 | S | S3.GvaFY17ORF4565P (46% identity) | S1.Gva8017AORF279P | |
| 281 | site-specific recombinase, phage integrase | |||
| 282 | S | S1.Gva8017BORF891P (100% identity) | S2.Gva8017AORF279P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1053 | 226 aa hypothetical protein | |||
| 1054 | M | M.Gva8017BORF1379P (100% identity) | M.Gva8017AORF1054P | |
| 1055 | 261 aa hypothetical protein | |||
| 682 | divergent AAA domain protein | |||
| 683 | R | Gva8017BORF544P (100% identity) | GATC | Gva8017AORF684P |
| 684 | M | M.Gva8017BORF544P (100% identity) | GATC | M.Gva8017AORF684P |
| 685 | phosphoglycerate mutase family protein | |||