Vibrio cholerae VC56 |
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Putative Vibrio cholerae VC56 RM systems
Ref: Chande,A. et al. unpublished
REBASE ref # 23336
Contig set: 4,193,045 bp
GenBank #: MIOV00000000 (NZ_MIOV00000000)
REBASE acronym: Vch56
Org_num: 21779
All begin BFX16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9880 | metal-dependent hydrolase | |||
| 9885 | R | VchVC53ORF9945P (100% identity) | Vch56ORF9905P | |
| 9890 | ATP-dependent DNA helicase RecG | |||
| 9895 | histidinol-phosphatase | |||
| 9900 | S | S.VchVC53ORF9945P (100% identity) | S.Vch56ORF9905P | |
| 9905 | M | M.VchVC53ORF9945P (100% identity) | M.Vch56ORF9905P | |
| 9910 | transcription factor | |||
| 2475 | 406 aa hypothetical protein | |||
| 2480 | R | VchVC53ORF2495P (100% identity) | Vch56ORF2490P | |
| 2485 | S | S.VchVC53ORF2495P (100% identity) | S.Vch56ORF2490P | |
| 2490 | M | M.VchVC53ORF2495P (100% identity) | M.Vch56ORF2490P | |
| 2495 | C | C.VchVC53ORF2495P (100% identity) | C.Vch56ORF2490P | |
| 2500 | 179 aa hypothetical protein | |||
| 4480 | 294 aa hypothetical protein | |||
| 4485 | R | VchVC53ORF4545P (100% identity) | Vch56ORF4505P | |
| 4490 | S | S.VchVC53ORF4545P (100% identity) | S.Vch56ORF4505P | |
| 4495 | chromosome segregation protein SMC | |||
| 4500 | 260 aa hypothetical protein | |||
| 4505 | M | M.VchVC53ORF4545P (100% identity) | M.Vch56ORF4505P | |
| 4510 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14785 | M | M.Vmi33654ORF5215P (100% identity) | M.Vch56ORF14785P | |
| 14790 | toxin HigB-2 | |||
| 18570 | DNA helicase | |||
| 18575 | R | VchVC53ORF18530P (100% identity) | CTCGAG | Vch56ORF18580P |
| 18580 | M | M.VchVC53ORF18530P (100% identity) | CTCGAG | M.Vch56ORF18580P |
| 18585 | 202 aa hypothetical protein | |||
| 12730 | ribulose-phosphate 3-epimerase | |||
| 12735 | M | M.VchVC53DamP (100% identity) | GATC | M.Vch56DamP |
| 12740 | cell division protein DamX | |||
| 1195 | MarR family transcriptional regulator | |||
| 1200 | M | M.VchVC53ORF1200P (100% identity) | CCNGG | M.Vch56ORF1200P |
| 1205 | restriction endonuclease | |||