Vibrio cholerae VC53 |
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Putative Vibrio cholerae VC53 RM systems
Ref: Chande,A. et al. unpublished
REBASE ref # 23336
Contig set: 4,217,958 bp
GenBank #: MIOU00000000 (NZ_MIOU00000000)
REBASE acronym: VchVC53
Org_num: 21768
All begin BFX15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9920 | metal-dependent hydrolase | |||
| 9925 | R | Vch56ORF9905P (100% identity) | VchVC53ORF9945P | |
| 9930 | ATP-dependent DNA helicase RecG | |||
| 9935 | histidinol-phosphatase | |||
| 9940 | S | S.Vch56ORF9905P (100% identity) | S.VchVC53ORF9945P | |
| 9945 | M | M.Vch56ORF9905P (100% identity) | M.VchVC53ORF9945P | |
| 9950 | transcription factor | |||
| 2480 | 406 aa hypothetical protein | |||
| 2485 | R | Vch56ORF2490P (100% identity) | VchVC53ORF2495P | |
| 2490 | S | S.Vch56ORF2490P (100% identity) | S.VchVC53ORF2495P | |
| 2495 | M | M.Vch56ORF2490P (100% identity) | M.VchVC53ORF2495P | |
| 2500 | C | C.VchV1116ORFBP (100% identity) | C.VchVC53ORF2495P | |
| 2505 | 179 aa hypothetical protein | |||
| 4520 | 294 aa hypothetical protein | |||
| 4525 | R | Vch56ORF4505P (100% identity) | VchVC53ORF4545P | |
| 4530 | S | S.Vch56ORF4505P (100% identity) | S.VchVC53ORF4545P | |
| 4535 | chromosome segregation protein SMC | |||
| 4540 | 260 aa hypothetical protein | |||
| 4545 | M | M.Vch56ORF4505P (100% identity) | M.VchVC53ORF4545P | |
| 4550 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18520 | DNA helicase | |||
| 18525 | R | Vch56ORF18580P (100% identity) | CTCGAG | VchVC53ORF18530P |
| 18530 | M | M.Vch56ORF18580P (100% identity) | CTCGAG | M.VchVC53ORF18530P |
| 18535 | 202 aa hypothetical protein | |||
| 14735 | DUF645 domain-containing protein | |||
| 14740 | M | M.Vmi33654ORF5215P (100% identity) | M.VchVC53ORF14740P | |
| 14745 | toxin HigB-2 | |||
| 12785 | ribulose-phosphate 3-epimerase | |||
| 12790 | M | M.Vch56DamP (100% identity) | GATC | M.VchVC53DamP |
| 12795 | cell division protein DamX | |||
| 1195 | MarR family transcriptional regulator | |||
| 1200 | M | M.Vch56ORF1200P (100% identity) | CCNGG | M.VchVC53ORF1200P |
| 1205 | restriction endonuclease | |||