Brocadia species 40 |
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Putative Brocadia species 40 RM systems
Ref: Ali,M. et al. unpublished
REBASE ref # 23310
Contig set: 2,928,683 bp
GenBank #: MJUW00000000 (NZ_MJUW00000000)
REBASE acronym: Bsp40
Org_num: 21744
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4 | Uncharacterized protein | |||
| 6 | S | S.Bsp10303ORFDP (39% identity) | S1.Bsp40ORFAP | |
| 8 | S | S.Bsp10303ORFDP (51% identity) | S2.Bsp40ORFAP | |
| 9 | Cell filamentation protein Fic | |||
| 2 | 90 aa hypothetical protein | |||
| 6 | S | S.Mps15ORF1095P (39% identity) | S.Bsp40ORFCP | |
| 9 | Restriction endonuclease subunit R | |||
| 6 | HsdS | |||
| 9 | R | Restriction endonuclease subunit R | Bsp40ORFDP | |
| 4 | Uncharacterized protein | |||
| 7 | R | Bsp10303ORFAP (96% identity) | Bsp40ORFKP | |
| 11 | Cell filamentation protein Fic | |||
| 13 | S | S.Cfu52655ORF4860P (40% identity) | S.Bsp40ORFKP | |
| 15 | Uncharacterized protein | |||
| 16 | 117 aa hypothetical protein | |||
| 18 | M | M.Bsp10303ORFAP (94% identity) | M.Bsp40ORFKP | |
| 22 | 114 aa hypothetical protein | |||
| 4 | Helicase subunit of dna repair complex | |||
| 6 | R | Bsp10303ORFIP (100% identity) | Bsp40ORFJP | |
| 9 | 98 aa hypothetical protein | |||
| 10 | M | M.Bsp10303ORFIP (100% identity) | M.Bsp40ORFJP | |
| 59 | 145 aa hypothetical protein | |||
| 60 | M | M.Bsp10303ORFHP (98% identity) | M.Bsp40ORFFP | |
| 62 | 67 aa hypothetical protein | |||
| 63 | 113 aa hypothetical protein | |||
| 64 | Transposase | |||
| 65 | Uncharacterized protein | |||
| 66 | 64 aa hypothetical protein | |||
| 67 | 89 aa hypothetical protein | |||
| 68 | 67 aa hypothetical protein | |||
| 69 | S | S.Nsp24002ORF12000P (30% identity) | S.Bsp40ORFFP | |
| 71 | 64 aa hypothetical protein | |||
| ??? | R | Bsp10303ORFLP (94% identity) | Bsp40ORFFP | |
| 78 | 63 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | M | M.MvuORF1019P (9% identity) | AGGCCT | M.Bsp40ORFEP |
| 5 | 63 aa hypothetical protein | |||
| 5 | Uncharacterized protein | |||
| 7 | R | PspSCADCORF209235P (78% identity) | CAGCTG | Bsp40ORFLP |
| 10 | M | Methyltransferase | CAGCTG | M.Bsp40ORFLP |
| 13 | Uncharacterized protein | |||
| 7 | Thiosulfate sulfurtransferase, rhodanese | |||
| 10 | M | M1.PbaD3ORF1683P (55% identity) | M1.Bsp40ORFOP | |
| 14 | M | UbaD11ORF10BP (66% identity) | M2.Bsp40ORFOP | |
| 17 | RM | VbaB154ORF11195P (69% identity) | Bsp40ORFOP | |
| 23 | 79 aa hypothetical protein | |||
| 31 | Ribonuclease R | |||
| 34 | RM | BsiJPN1ORF1722P (81% identity) | Bsp40ORFMP | |
| 37 | Uncharacterized protein | |||
| 40 | 61 aa hypothetical protein | |||
| ??? | RM | Bsp10303ORFCP (68% identity) | Bsp40ORFBP | |
| 46 | Uncharacterized protein | |||
| 129 | Uncharacterized protein | |||
| 131 | RM | KstMBR1ORF1875P (67% identity) | Bsp40ORFPP | |
| 133 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6 | restriction modification protein | |||
| ??? | M | M.Bsp10303ORFJP (88% identity) | M.Bsp40ORFHP | |
| 19 | 77 aa hypothetical protein | |||
| 20 | R | Bsp10303ORFEP (96% identity) | Bsp40ORFQP | |
| 24 | 61 aa hypothetical protein | |||
| 25 | M | M.Bsp10303ORFEP (24% identity) | M.Bsp40ORFQP | |
| 26 | Helicase subunit of dna repair complex | |||
| 52 | Precorrin-6x reductase | |||
| 55 | M | M.BsiJPN1ORF3483P (62% identity) | M.Bsp40ORFIP | |
| 59 | DNA-binding protein | |||
| 60 | R | BsiJPN1ORF3483P (81% identity) | Bsp40ORFIP | |
| 61 | 59 aa hypothetical protein | |||
| 66 | Uncharacterized protein | |||
| ??? | M | M.Mcu11139ORF10280P (45% identity) | M.Bsp40ORFNP | |
| 70 | Transcriptional regulator | |||
| 71 | ATP-dependent DNA helicase RecG | |||
| 72 | 302 aa hypothetical protein | |||
| 73 | R | TitORF1899P (63% identity) | Bsp40ORFNP | |
| 74 | 89 aa hypothetical protein | |||
| 131 | Glutamate--tRNA ligase | |||
| 134 | R | Bsp10303ORFJP (97% identity) | Bsp40ORFGP | |
| 135 | Cell filamentation protein Fic | |||
| 136 | 143 aa hypothetical protein | |||
| 137 | Uncharacterized protein | |||
| 138 | 73 aa hypothetical protein | |||
| 139 | 69 aa hypothetical protein | |||
| 140 | M | M.LadPE29ORF19520P (56% identity) | M.Bsp40ORFGP | |
| 141 | Uncharacterized protein | |||