Nocardia terpenica IFM 0406 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Nocardia terpenica IFM 0406 RM systems
Ref: Buchmann,A. et al. unpublished
REBASE ref # 23299
Contig set: 9,276,843 bp
GenBank #: LWGR00000000 (NZ_LWGR00000000)
REBASE acronym: Nte406
Org_num: 21454
All begin AWN90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 38540 | 316 aa hypothetical protein | |||
| 38545 | M | M.NsoY48ORF26325P (83% identity) | M.Nte406ORF38545P | |
| ??? | S | S1.Mne43536ORF23435P (38% identity) | S.Nte406ORF38545P | |
| 38550 | R | Ncy6504IP (70% identity) | Nte406ORF38545P | |
| 38555 | 82 aa hypothetical protein | |||
| 11785 | 142 aa hypothetical protein | |||
| 11790 | R | Csp66ORF16060P (74% identity) | Nte406ORF11790P | |
| 11795 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40130 | 65 aa hypothetical protein | |||
| ??? | M | DNA methylase | M.Nte406ORFBP | |
| 40145 | 267 aa hypothetical protein | |||
| 40170 | 396 aa hypothetical protein | |||
| 40175 | M | M.Nte406ORF41235P (73% identity) | CCCGGG | M.Nte406ORF40175P |
| 40180 | 94 aa hypothetical protein | |||
| 10620 | 226 aa hypothetical protein | |||
| 10625 | M | M.Nte001ORF1650P (99% identity) | M.Nte406ORF10625P | |
| 10630 | 240 aa hypothetical protein | |||
| 11065 | 100 aa hypothetical protein | |||
| 11070 | M | M.Nte001ORF1090P (97% identity) | CTCGAG | M.Nte406ORF11070P |
| 11075 | V | V.Nte001ORF1090P (78% identity) | V.Nte406ORF11070P | |
| 11080 | 203 aa hypothetical protein | |||
| 6270 | ketol-acid reductoisomerase | |||
| ??? | R | Mmu44124ORF7150P (65% identity) | GCCGGC | Nte406ORF6275P |
| ??? | M | M.Ngi1619ORF22730P (56% identity) | GCCGGC | M.Nte406ORF6275P |
| ??? | V | V.Nio5646ORF30800P (69% identity) | V.Nte406ORF6275P | |
| 6280 | pyridoxamine 5-phosphate oxidase | |||
| 19545 | 164 aa hypothetical protein | |||
| 19550 | M | M.Nte001ORF30515P (93% identity) | M.Nte406ORF19550P | |
| 19555 | 155 aa hypothetical protein | |||
| 11385 | 167 aa hypothetical protein | |||
| ??? | M | M.Nte12715ORF26040P (36% identity) | M.Nte406ORFAP | |
| 11390 | 85 aa hypothetical protein | |||
| 41230 | 85 aa hypothetical protein | |||
| 41235 | M | M.Nte406ORF40175P (73% identity) | CCCGGG | M.Nte406ORF41235P |
| 41240 | 94 aa hypothetical protein | |||
| 41255 | 110 aa hypothetical protein | |||
| 41260 | M | M.Nte001ORF1595P (59% identity) | M.Nte406ORF41260P | |
| 41265 | 97 aa hypothetical protein | |||
| 35630 | TetR family transcriptional regulator | |||
| 35635 | M | M.Nte12715ORF12425P (96% identity) | ATCGAT | M.Nte406ORF35635P |
| 35640 | 261 aa hypothetical protein | |||