Escherichia coli GN1221 |
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Putative Escherichia coli GN1221 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,328,270 bp
GenBank #: LXIX00000000 (NZ_LXIX00000000)
REBASE acronym: Eco1221
Org_num: 21512
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21 | 63 aa hypothetical protein | |||
| 23 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco1221ORFEP |
| 29 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco1221ORFEP |
| 30 | 218 aa hypothetical protein | |||
| 31 | 115 aa hypothetical protein | |||
| 32 | 72 aa hypothetical protein | |||
| 33 | Appr-1-p processing protein | |||
| 34 | 99 aa hypothetical protein | |||
| 35 | R | EcoRC1ORF26055P (100% identity) | CCAYNNNNNGTTY | Eco1221ORFEP |
| 40 | metal-dependent hydrolase | |||
| 1650 | 82 aa hypothetical protein | |||
| 1651 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1221ORFBP |
| 1654 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1221ORFBP |
| 1656 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1221ORFBP |
| 1658 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15 | NinB | |||
| ??? | M | M.EcoC3108ORFMP (95% identity) | GATC | M.Eco1221ORFHP |
| 23 | 64 aa hypothetical protein | |||
| 16 | 101 aa hypothetical protein | |||
| 18 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco1221ORFGP | |
| 21 | 73 aa hypothetical protein | |||
| 26 | membrane protein | |||
| 27 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1221ORFCP |
| 28 | Fis family transcriptional regulator | |||
| 109 | ribulose-phosphate 3-epimerase | |||
| 110 | M | DamMyc-Pc | GATC | M.Eco1221DamP |
| 113 | cell division protein DamX | |||
| 142 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1221ORFFP | |
| 149 | 116 aa hypothetical protein | |||
| 240 | 66 aa hypothetical protein BY68_22700 | |||
| ??? | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1221ORFDP | |
| 249 | 104 aa unknown protein encoded by prophage CP-933O | |||
| 377 | drug/metabolite exporter YedA | |||
| 379 | V | V.EcoPT54DcmP (100% identity) | V.Eco1221DcmP | |
| 382 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1221DcmP |
| 384 | phosphohydrolase | |||
| 1779 | 138 aa hypothetical protein | |||
| 1780 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1221ORFAP |
| 1788 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1661 | 81 aa hypothetical protein Ec53638_1442 | |||
| 1662 | R | EcoX21GmrDP (100% identity) | Eco1221GmrDP | |
| 1663 | 293 aa hypothetical protein | |||