Escherichia coli GN1220 |
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Putative Escherichia coli GN1220 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,441,270 bp
GenBank #: LXIY00000000 (NZ_LXIY00000000)
REBASE acronym: Eco1220
Org_num: 21443
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 725 | 82 aa hypothetical protein | |||
| 726 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1220ORFCP |
| 729 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1220ORFCP |
| 731 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco1220ORFCP |
| 733 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 104 aa unknown protein encoded by prophage CP-933O | |||
| ??? | M | hypothetical protein | M.Eco1220ORFHP | |
| 11 | 106 aa hypothetical protein BY68_22700 | |||
| 7 | yjhS, partial | |||
| ??? | M | hypothetical protein | M.Eco1220ORFKP | |
| 14 | ARAC-type regulatory protein, partial | |||
| 29 | 95 aa hypothetical protein phi191_00023 | |||
| 30 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco1220ORFIP |
| 32 | R | Sso1099IP (100% identity) | CTGCAG | Eco1220ORFIP |
| 33 | 65 aa hypothetical protein | |||
| 62 | 82 aa hypothetical protein | |||
| 64 | M | DNA methylase | M.Eco1220ORFJP | |
| 68 | 101 aa hypothetical protein | |||
| 51 | NinB | |||
| ??? | M | M.EcoC3108ORFMP (95% identity) | GATC | M.Eco1220ORFGP |
| 59 | 64 aa hypothetical protein | |||
| 30 | phosphohydrolase | |||
| 31 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1220DcmP |
| 33 | V | V.EcoPT54DcmP (100% identity) | V.Eco1220DcmP | |
| 37 | drug/metabolite exporter YedA | |||
| 201 | 80 aa hypothetical protein AMK83_26690 | |||
| ??? | M | hypothetical protein | M.Eco1220ORFAP | |
| 211 | 134 aa hypothetical protein | |||
| 143 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1220ORFFP | |
| 150 | 116 aa hypothetical protein | |||
| 649 | 128 aa hypothetical protein | |||
| 652 | M | M.Eco194195ORFBP (100% identity) | GATC | M.Eco1220ORFEP |
| 656 | 149 aa hypothetical protein | |||
| 739 | Fis family transcriptional regulator | |||
| 740 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1220ORFDP |
| 741 | membrane protein | |||
| 685 | cell division protein DamX | |||
| 688 | M | DamMyc-Pc | GATC | M.Eco1220DamP |
| 690 | ribulose-phosphate 3-epimerase | |||
| 854 | 138 aa hypothetical protein | |||
| 855 | RM | EcosPA8ORF17390P (99% identity) | GAAABCC | Eco1220ORFBP |
| 863 | helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 736 | 81 aa hypothetical protein Ec53638_1442 | |||
| 737 | R | EcoX21GmrDP (100% identity) | Eco1220GmrDP | |
| 738 | 293 aa hypothetical protein | |||