Escherichia coli GN1218 |
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Putative Escherichia coli GN1218 RM systems
Ref: Carbonari,C.C. and Rivas,M. unpublished
REBASE ref # 23121
Contig set: 5,473,683 bp
GenBank #: LXJA00000000 (NZ_LXJA00000000)
REBASE acronym: Eco1218
Org_num: 21433
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 789 | 113 aa hypothetical protein | |||
| 792 | S | S.Eco1227ORFAP (100% identity) | CACNNNNNNNCTGG | S.Eco1218ORFBP |
| 794 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco1218ORFBP |
| 796 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco1218ORFBP |
| 799 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.EcoTWORF1742P (100% identity) | M.Eco1218ORFKP | |
| 4 | ARAC-type regulatory protein, partial | |||
| 2 | 104 aa unknown protein encoded by prophage CP-933O | |||
| 3 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco1218ORFIP | |
| 6 | 66 aa hypothetical protein BY68_22700 | |||
| 8 | 116 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco1218ORFAP | |
| 15 | 90 aa hypothetical protein | |||
| 10 | 92 aa hypothetical protein | |||
| ??? | M | hypothetical protein | GATC | M.Eco1218ORFJP |
| 18 | endonuclease | |||
| 24 | 109 aa hypothetical protein | |||
| 27 | M | DNA methylase | M.Eco1218ORFHP | |
| 30 | 101 aa hypothetical protein | |||
| 20 | 134 aa hypothetical protein | |||
| 24 | M | DNA methylase | M.Eco1218ORFFP | |
| 27 | 142 aa hypothetical protein HMPREF9535_02859 | |||
| 24 | 76 aa hypothetical protein | |||
| 27 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco1218ORFEP |
| 31 | 128 aa hypothetical protein | |||
| 21 | 64 aa hypothetical protein | |||
| ??? | M | hypothetical protein | GATC | M.Eco1218ORFGP |
| 28 | NinB | |||
| 130 | drug/metabolite exporter YedA | |||
| 132 | V | V.EcoPT54DcmP (100% identity) | V.Eco1218DcmP | |
| 135 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1218DcmP |
| 137 | phosphohydrolase | |||
| 662 | helicase | |||
| 664 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco1218ORFCP |
| 673 | 138 aa hypothetical protein | |||
| 692 | cell division protein DamX | |||
| 695 | M | DamMyc-Pc | GATC | M.Eco1218DamP |
| 697 | ribulose-phosphate 3-epimerase | |||
| 871 | Fis family transcriptional regulator | |||
| 872 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco1218ORFDP |
| 873 | membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 786 | 293 aa hypothetical protein | |||
| 787 | R | EcoX21GmrDP (100% identity) | Eco1218GmrDP | |
| 788 | 81 aa hypothetical protein Ec53638_1442 | |||