Cyanobacterium species IPPAS B-1200 |
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Putative Cyanobacterium species IPPAS B-1200 RM systems
Ref: Starikov,A.Y. et al. Genome Announc 4 (6) (2016)
REBASE ref # 23056
Contig set: 3,410,249 bp
GenBank #: LWHC00000000 (NZ_LWHC00000000)
REBASE acronym: CspB1200
Org_num: 21502
All begin A5482_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13480 | 69 aa hypothetical protein | |||
| 13485 | R | Gsp3709ORF3688BP (50% identity) | CspB1200ORF13530P | |
| 13490 | DNA-binding protein | |||
| 13495 | 74 aa hypothetical protein | |||
| 13500 | 82 aa hypothetical protein | |||
| 13505 | 108 aa hypothetical protein | |||
| 13510 | S | S.Adu3ORF34510P (71% identity) | S.CspB1200ORF13530P | |
| 13515 | 106 aa hypothetical protein | |||
| 13520 | transcriptional regulator | |||
| 13525 | plasmid maintenance system killer | |||
| 13530 | M | M.Gsp3709ORF3688P (92% identity) | M.CspB1200ORF13530P | |
| 13535 | 136 aa hypothetical protein | |||
| 13130 | 124 aa hypothetical protein | |||
| 13135 | S | S.Gsp3709ORF3728P (63% identity) | S.CspB1200ORF13090P | |
| 13140 | 83 aa hypothetical protein | |||
| 13145 | 395 aa hypothetical protein | |||
| 13150 | R | CstHL69ORFBP (91% identity) | CspB1200ORF13090P | |
| 13155 | 152 aa hypothetical protein | |||
| 14155 | 179 aa hypothetical protein | |||
| 14160 | M | M.PluTII (87% identity) | M.CspB1200ORF14160P | |
| 14165 | 71 aa hypothetical protein | |||
| 14170 | 80 aa hypothetical protein | |||
| 14175 | 83 aa hypothetical protein | |||
| 14180 | S | S1.Pmu1806ORFGP (53% identity) | S.CspB1200ORF14160P | |
| 14185 | R | TspCT3ORF14475P (83% identity) | CspB1200ORF14160P | |
| 14190 | 90 aa hypothetical protein | |||
| 7705 | cold-shock protein | |||
| 7710 | R | CstHL69ORFJP (94% identity) | CspB1200ORF7770P | |
| 7715 | 90 aa hypothetical protein | |||
| 7720 | 73 aa hypothetical protein | |||
| 7725 | 74 aa hypothetical protein | |||
| 7730 | 92 aa hypothetical protein | |||
| 7735 | 74 aa hypothetical protein | |||
| 7740 | S | S.Psp001ORF21440P (49% identity) | S.CspB1200ORF7770P | |
| 7745 | 115 aa hypothetical protein | |||
| 7750 | twitching motility protein PilT | |||
| 7755 | 65 aa hypothetical protein | |||
| 7760 | pilus assembly protein | |||
| 7765 | 67 aa hypothetical protein | |||
| 7770 | M | M.Cspa4ORF18800P (88% identity) | M.CspB1200ORF7770P | |
| 7775 | 124 aa hypothetical protein | |||
| 8100 | NTPase (NACHT family) | |||
| 8105 | R | CstHL69ORFKP (96% identity) | CspB1200ORF8120P | |
| 8110 | transposase | |||
| 8115 | S | S.Lsp6406VIII (30% identity) | S.CspB1200ORF8120P | |
| ??? | M | M.Cst69ORF805P (60% identity) | M.CspB1200ORF8120P | |
| 8130 | 133 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2930 | R | CstHL69ORFNP (46% identity) | CCCGC | CspB1200ORF2935P |
| 2935 | M | M2.CstHL69ORFNP (87% identity) | CCCGC | M.CspB1200ORF2935P |
| 2940 | transcriptional regulator | |||
| 15305 | endonuclease | |||
| 15310 | R | AspEL33ORFAP (67% identity) | GCSGC | CspB1200ORF15305P |
| 15315 | M | M.PpaA7ORF3855P (59% identity) | GCSGC | M.CspB1200ORF15305P |
| 14220 | phosphoglucomutase | |||
| 14225 | M | M.CstHL69ORFQP (97% identity) | CCGG | M.CspB1200ORF14225P |
| 14230 | 120 aa hypothetical protein | |||
| 14525 | histidine kinase | |||
| 14530 | M | M.CstHL69ORFIP (80% identity) | CCWGG | M.CspB1200ORF14530P |
| 14535 | YraN family protein | |||
| 4765 | 581 aa hypothetical protein | |||
| 4770 | M | M.CstHL69ORFSP (96% identity) | CGATCG | M.CspB1200ORF4770P |
| 4775 | photosystem I chlorophyll a apoprotein A2 | |||
| 13295 | excinuclease ABC subunit C | |||
| 13300 | M | M.Gsp3708ORF3551P (77% identity) | M.CspB1200ORF13300P | |
| 13305 | 83 aa hypothetical protein | |||
| 12910 | 87 aa hypothetical protein | |||
| 12915 | M | M.MspMC19ORF18890P (76% identity) | M.CspB1200ORF12915P | |
| 12920 | HicB family protein | |||
| 11785 | 64 aa hypothetical protein | |||
| 11790 | M | M.Gsp3708ORF1272P (84% identity) | TCTAGA | M.CspB1200ORF11790P |
| 11795 | ABC transporter substrate-binding protein | |||
| 9960 | 166 aa hypothetical protein | |||
| 9965 | M | M.Psp7367ORF1535P (59% identity) | CAGCTG | M.CspB1200ORF9965P |
| 9970 | 1444 aa hypothetical protein | |||
| 6435 | oxidoreductase | |||
| 6440 | R | Cst69ORF14495P (99% identity) | CspB1200ORF6445P | |
| 6445 | M | M.CstHL69ORFPP (97% identity) | GCGC | M.CspB1200ORF6445P |
| 6450 | N-acetyl-gamma-glutamyl-phosphate reductase | |||
| 5055 | tRNA uridine(34) 5-carboxymethylaminomethyl | |||
| ??? | RM | Pag365ORF1404P (63% identity) | CspB1200ORF5060P | |
| 5070 | 455 aa hypothetical protein | |||
| 9575 | DNA mismatch repair protein MutS | |||
| 9580 | R | CstHL69ORFFP (94% identity) | GGNCC | CspB1200ORF9585P |
| 9585 | M | M.CstHL69ORFFP (60% identity) | GGNCC | M.CspB1200ORF9585P |
| 6140 | methylthioribulose-1-phosphate dehydratase | |||
| 6145 | M | M.CstHL69ORFHP (97% identity) | GATC | M.CspB1200ORF6145P |
| 6150 | iron ABC transporter substrate-binding protein | |||
| 435 | ribulose 1,5-bisphosphate carboxylase small | |||
| 440 | RM | Gsp3708ORF3632P (57% identity) | CspB1200ORF440P | |
| 445 | biopolymer transporter ExbD | |||