Vibrio cholerae L11 |
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Putative Vibrio cholerae L11 RM systems
Ref: Thorell,K. et al. unpublished
REBASE ref # 23052
Contig set: 4,000,245 bp
GenBank #: MDYI00000000 (NZ_MDYI00000000)
REBASE acronym: VcoL11
Org_num: 21653
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 77 | 251 aa hypothetical protein | |||
| 78 | R | Vch30ORF2444P (98% identity) | VcoL11ORFAP | |
| 81 | 338 aa hypothetical protein | |||
| 82 | S | S.Vch30ORF2444P (55% identity) | S.VcoL11ORFAP | |
| 84 | M | type I restriction-modification system subunit M | M.VcoL11ORFABP | |
| 86 | IS200/IS605 family transposase | |||
| 87 | M | M.Vch30ORF2444P (62% identity) | M.VcoL11ORFAAP | |
| 88 | 231 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 43 | 110 aa hypothetical protein | |||
| 44 | M | M.Eta2034ORFNP (63% identity) | RGGNCCY | M.VcoL11ORFBP |
| 45 | R | Eta2034ORFFP (56% identity) | RGGNCCY | VcoL11ORFBP |
| 46 | IS5 family transposase | |||
| 90 | 93 aa hypothetical protein, partial | |||
| 91 | M | M.Vmi33654ORF5215P (100% identity) | M.VcoL11ORFFP | |
| 93 | 71 aa hypothetical protein VCF_001712 | |||
| 295 | Uncharacterised protein | |||
| 296 | M | M.VspNIH41DamP (100% identity) | GATC | M.VcoL11ORFDP |
| 297 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 80 | transcription factor | |||
| 81 | M | M.AhyA8ORFDP (99% identity) | M.VcoL11ORFEP | |
| 82 | R | Vpa107ORF3101P (98% identity) | VcoL11ORFEP | |
| 83 | 65 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 191 | nuclease | |||
| 192 | R | Vch1ORF3300P (99% identity) | VcoL11ORFCP | |
| 193 | SAM-dependent methyltransferase | |||