Clostridium species Bc-iso-3 |
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Putative Clostridium species Bc-iso-3 RM systems
Ref: Sun,L. and Schnurer,A. unpublished
REBASE ref # 23047
Contig set: 4,327,139 bp
GenBank #: LXSB00000000 (NZ_LXSB00000000)
REBASE acronym: Cspbc3
Org_num: 21517
All begin A7W90_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5745 | 60 aa hypothetical protein | |||
| ??? | S | S.BadTSABORF5115P (36% identity) | S.Cspbc3ORF5755P | |
| 5755 | M | M.PmeBin259ORFDP (50% identity) | M.Cspbc3ORF5755P | |
| 5760 | R | Esi703ORF10120P (55% identity) | Cspbc3ORF5755P | |
| 5765 | 189 aa hypothetical protein | |||
| 12385 | 351 aa hypothetical protein | |||
| 12390 | S | S.Bsu2754ORF2379P (36% identity) | S.Cspbc3ORF12395P | |
| 12395 | M | M.TthTG57ORF2112P (94% identity) | M.Cspbc3ORF12395P | |
| 12400 | 120 aa hypothetical protein | |||
| 13625 | nucleoside triphosphatase | |||
| 13630 | C | C.SspNJN17ORF10855P (100% identity) | C.Cspbc3ORF13635P | |
| 13635 | M | M.Bba293ORF16555P (99% identity) | M.Cspbc3ORF13635P | |
| 13640 | cell filamentation protein Fic | |||
| 13645 | S | S.DcaSRBORF2301P (65% identity) | S.Cspbc3ORF13635P | |
| 13650 | R | FbaA5CORFDP (99% identity) | Cspbc3ORF13635P | |
| 13655 | 493 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4365 | 233 aa hypothetical protein | |||
| 4370 | M | 483 aa hypothetical protein | M1.Cspbc3ORF4370P | |
| 4375 | M | M.Efa4ORF1648P (47% identity) | CCGCGG | M2.Cspbc3ORF4370P |
| 4380 | R | PmeBin99ORFEP (92% identity) | CCGCGG | Cspbc3ORF4370P |
| 4385 | 640 aa hypothetical protein | |||
| 9290 | 768 aa hypothetical protein | |||
| 9295 | RM | Dba7044ORFJP (42% identity) | Cspbc3ORF9295P | |
| 9300 | 1139 aa hypothetical protein | |||
| 10040 | helicase SNF2 | |||
| 10045 | M | M.BjeJCEORFFP (27% identity) | M.Cspbc3ORF10045BP | |
| 10050 | transposase | |||
| 10055 | M | M.BciVORFEP (37% identity) | M.Cspbc3ORF10045AP | |
| 10060 | 182 aa hypothetical protein | |||
| 12070 | TIGR02687 family protein | |||
| 12075 | RM | Ccl19732ORF253P (72% identity) | Cspbc3ORF12075P | |
| 12080 | 1186 aa hypothetical protein | |||
| 14490 | carbon storage regulator | |||
| 14495 | M | M.Cst21531ORF1246P (42% identity) | M.Cspbc3ORF14495P | |
| 14500 | 427 aa hypothetical protein | |||
| 14495 | DNA methylase N-4 | |||
| 14500 | R | Tpr11158IIP (67% identity) | GATC | Cspbc3ORF14505P |
| 14505 | M | M.MspH1ORFCP (71% identity) | GATC | M.Cspbc3ORF14505P |
| 14510 | flagellin | |||
| 15685 | Cro/Cl family transcriptional regulator | |||
| 15690 | M | M.Pst17678ORF585P (39% identity) | GCSGC | M.Cspbc3ORF15690P |
| 15695 | 748 aa hypothetical protein | |||
| 15820 | methionine adenosyltransferase | |||
| 15825 | M | M.Eba1738ORF5770P (94% identity) | M1.Cspbc3ORF15825P | |
| 15830 | M | M.Eba1738ORF5765P (89% identity) | M2.Cspbc3ORF15825P | |
| 15835 | virulence protein | |||