Gordonia species UCD-TK1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Gordonia species UCD-TK1 RM systems
Ref: Koenigsaecker,T.M. et al. unpublished
REBASE ref # 22894
Contig set: 5,464,889 bp
GenBank #: LZMP00000000 (NZ_LZMP00000000)
REBASE acronym: GspTK1
Org_num: 21548
All begin A9310_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18875 | 126 aa hypothetical protein | |||
| 18880 | R | Gspw5E2ORF75P (89% identity) | GspTK1ORF18900P | |
| 18885 | 613 aa hypothetical protein | |||
| 18890 | restriction endonuclease | |||
| ??? | S | S.AteNZORF170P (41% identity) | S.GspTK1ORF18900P | |
| 18900 | M | M.Gspw5E2ORF75P (93% identity) | M.GspTK1ORF18900P | |
| 18905 | 305 aa hypothetical protein | |||
| 17715 | 151 aa hypothetical protein | |||
| 17720 | R | Gho9ORF205P (80% identity) | GspTK1ORF17735P | |
| 17725 | 316 aa hypothetical protein | |||
| 17730 | S | S.Dspp6bORF16595P (45% identity) | S.GspTK1ORF17735P | |
| 17735 | M | M.Gho9ORF205P (90% identity) | M.GspTK1ORF17735P | |
| 17745 | peptide-binding protein | |||
| 10345 | 301 aa hypothetical protein | |||
| 10350 | R | Gho31934ORF8905P (97% identity) | GspTK1ORF10360P | |
| 10355 | S | S.Spr5965ORFCP (31% identity) | S.GspTK1ORF10360P | |
| 10360 | M | M.Gho31934ORF8905P (93% identity) | M.GspTK1ORF10360P | |
| 10365 | 630 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22415 | 118 aa hypothetical protein | |||
| 22420 | M | M.GspA443ORF18570P (89% identity) | M.GspTK1ORF22420P | |
| 22425 | 255 aa hypothetical protein | |||
| 21890 | 98 aa hypothetical protein | |||
| 21895 | M | M1.Mab199ORF10700P (30% identity) | M.GspTK1ORF21895P | |
| 21900 | 65 aa hypothetical protein | |||
| 21385 | diadenosine tetraphosphate hydrolase | |||
| 21390 | M | M.Gsp100ORFBP (82% identity) | GGATC | M.GspTK1ORF21390P |
| 21395 | 279 aa hypothetical protein | |||
| 23170 | M | M.Gsp135ORF11435P (95% identity) | GCCGGC | M.GspTK1ORF23170P |
| 23175 | R | Osp3305ORF12285P (73% identity) | GCCGGC | GspTK1ORF23170P |
| 23180 | 221 aa hypothetical protein | |||
| 11385 | 222 aa hypothetical protein | |||
| 11390 | M | M.GteJC02ORF12160P (99% identity) | M.GspTK1ORF11390P | |
| 11395 | 112 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17215 | 230 aa hypothetical protein | |||
| 17220 | R | Rso18930ORF635P (70% identity) | GspTK1ORF17225P | |
| 17225 | M | M.Gsp91597ORF23665P (59% identity) | M.GspTK1ORF17225P | |
| 17230 | 263 aa hypothetical protein | |||
| 11590 | 70 aa hypothetical protein | |||
| 11595 | R | Msh7336ORF4337P (76% identity) | GspTK1ORF11600P | |
| 11600 | M | M.Gam43602ORF20150P (70% identity) | M.GspTK1ORF11600P | |
| 11605 | 353 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18885 | 613 aa hypothetical protein | |||
| 18890 | R | Rqi2784DMrrP (59% identity) | GspTK1MrrP | |
| 18895 | 105 aa hypothetical protein | |||