Salmonella enterica subsp. enterica SE819 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica SE819 RM systems
Ref: Khajanchi,B. et al. unpublished
REBASE ref # 22893
Contig set: 4,914,810 bp
GenBank #: LSZE00000000 (NZ_LSZE00000000)
REBASE acronym: Sen819
Org_num: 13685
All begin AY604_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23455 | 255 aa hypothetical protein | |||
| 23460 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen819ORF23465P |
| 23465 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen819ORF23465P |
| 23470 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | Sen819ORF23465P |
| 23475 | transposase | |||
| 5230 | 110 aa hypothetical protein | |||
| 5235 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen819ORF5240P |
| 5240 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen819ORF5240P |
| 5245 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen819ORF5240P |
| 5250 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5065 | helicase | |||
| 5070 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen819ORF5070P |
| 13895 | 73 aa hypothetical protein | |||
| 13900 | M | M.StyR64ORFAP (100% identity) | M.Sen819ORF13900P | |
| 13905 | 308 aa hypothetical protein | |||
| 7390 | hydrolase | |||
| 7395 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen819Dcm2P |
| 7400 | V | V.StyTDcmP (100% identity) | V.Sen819Dcm2P | |
| 7405 | drug/metabolite exporter YedA | |||
| 16835 | exonuclease | |||
| 16840 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen819ORF16840P |
| 16845 | 79 aa hypothetical protein | |||
| 11600 | Fis family transcriptional regulator | |||
| 11605 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen819ORF16825P |
| 11610 | 54 aa hypothetical protein | |||
| 3785 | cell division protein DamX | |||
| 3790 | M | M.StyTDamP (100% identity) | GATC | M.Sen819DamP |
| 3795 | ribulose phosphate epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1585 | 33 aa hypothetical protein | |||
| 1590 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen819ORF1595P |
| 1595 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen819ORF1595P |
| 1600 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5245 | DEAD/DEAH box helicase | |||
| 5250 | R | StyUK1MrrP (100% identity) | Sen819Mrr2P | |
| 5255 | 95 aa hypothetical protein | |||