Prevotella intermedia 17F |
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Putative Prevotella intermedia 17F RM systems
Ref: Johnston,C.D. and Rittling,S.R. unpublished
REBASE ref # 25088
| Sequence length: | GenBank #: | |
| chromosome I: | 2,119,682 bp | CP019302 |
| chromosome II: | 616,633 bp | CP019303 |
REBASE acronym: Pin17F
Org_num: 18211
All begin BWX40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 935 | zinc metalloprotease | |||
| 940 | R | Pin17ORF476P (100% identity) | GAGNNNNNNTGG | Pin17FIVP |
| 945 | M | M.Pin17ORF476P (97% identity) | GAGNNNNNNTGG | M.Pin17FIV |
| 950 | 339 aa hypothetical protein | |||
| 955 | S | S.Pin172ORF283P (100% identity) | GAGNNNNNNTGG | S.Pin17FIV |
| 960 | 92 aa hypothetical protein | |||
| chromosome II | ||||
| 12050 | site-specific integrase | |||
| 12055 | S | S1.Pin172ORF2481P (52% identity) | GAGNNNNNNTTA | S.Pin17FORF12055P |
| 12060 | 0 aa hypothetical protein | |||
| 12060 | 0 aa hypothetical protein | |||
| 12065 | S | S2.Pin17ORF406P (100% identity) | GAGNNNNNNTTA | S.Pin17FV |
| 12070 | cell filamentation protein Fic | |||
| 12075 | M | M.Pin17ORF406P (100% identity) | GAGNNNNNNTTA | M.Pin17FV |
| 12080 | 567 aa hypothetical protein | |||
| 12085 | R | Pin17ORF406P (100% identity) | GAGNNNNNNTTA | Pin17FVP |
| ??? | C | C.PinWW414ORF5835P (100% identity) | C.Pin17FVP | |
| 12095 | IS982 family transposase | |||
| 9480 | 79 aa hypothetical protein | |||
| 9485 | R | Pin17ORF406P (94% identity) | Pin17FORF9485P | |
| 9490 | IS982 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2970 | 80 aa hypothetical protein | |||
| 2975 | M | M.Pin2833ORF9525P (91% identity) | M.Pin17FORF2975P | |
| 2980 | thymidylate synthase | |||
| chromosome II | ||||
| 9585 | SNF2/RAD54 family helicase | |||
| 9590 | RM | Pin172ORF2502P (98% identity) | GGYGAB | Pin17FIII |
| ??? | Eco57I restriction-modification methylase | |||
| 9590 | restriction endonuclease | |||
| ??? | RM | Pin17ORF429P (25% identity) | Pin17FORF9595P | |
| 9600 | invertase | |||
| 11105 | 1081 aa hypothetical protein | |||
| 11110 | R | Pin172ORF2280P (100% identity) | Pin17FORF11110P | |
| 11115 | oxidoreductase | |||
| 12185 | SNF2/RAD54 family helicase | |||
| 12190 | RM | Pin17ORF429P (91% identity) | Pin17FORF12190P | |
| 12195 | type II restriction endonuclease subunit M | |||
| 12190 | restriction endonuclease | |||
| 12195 | RM | Pin17FIII (20% identity) | Pin17FORF12195P | |
| 12200 | invertase | |||