Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033930 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033930 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,846,466 bp
GenBank #: LUHX00000000 (NZ_LUHX00000000)
REBASE acronym: Sen33930
Org_num: 21377
All begin AF371_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10340 | restriction endonuclease | |||
| 10345 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33930ORF10350P |
| 10350 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen33930ORF10350P |
| 10355 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33930ORF10350P |
| 10360 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23215 | 221 aa hypothetical protein | |||
| 23220 | M | M.Sens29958ORF6205P (100% identity) | M.Sen33930ORF23220P | |
| 23225 | 217 aa hypothetical protein | |||
| 22070 | 160 aa hypothetical protein | |||
| 22075 | M | M.StyUK1V (100% identity) | GATC | M.Sen33930ORF22075P |
| 22080 | crossover junction endodeoxyribonuclease | |||
| 17730 | 54 aa hypothetical protein | |||
| 17735 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33930ORF17735P |
| 17740 | Fis family transcriptional regulator | |||
| 14860 | multidrug DMT transporter | |||
| 14865 | V | V.StyUK1DcmP (100% identity) | V.Sen33930DcmP | |
| 14870 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33930DcmP |
| 14875 | hydrolase | |||
| 15435 | cell division protein DamX | |||
| 15440 | M | M.StyTDamP (100% identity) | GATC | M.Sen33930DamP |
| 15445 | ribulose phosphate epimerase | |||
| 10510 | DNA repair protein | |||
| 10515 | RM | StyUK1IV (100% identity) | GATCAG | Sen33930ORF10515P |
| 10520 | 363 aa hypothetical protein | |||
| 4800 | 62 aa hypothetical protein | |||
| 4805 | M | M.StyUK1ORFAP (100% identity) | M.Sen33930ORF4805P | |
| 4810 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | 33 aa hypothetical protein | |||
| 535 | R | StyUK1IP (99% identity) | CAGAG | Sen33930ORF540P |
| 540 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33930ORF540P |
| 545 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10335 | 95 aa hypothetical protein | |||
| 10340 | R | StyUK1MrrP (100% identity) | Sen33930MrrP | |
| 10345 | DEAD/DEAH box helicase | |||