Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033896 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033896 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 4,788,552 bp
GenBank #: LVFS00000000 (NZ_LVFS00000000)
REBASE acronym: Sen33896
Org_num: 21363
All begin AF386_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10405 | 110 aa hypothetical protein | |||
| 10410 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33896ORF10415P |
| 10415 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33896ORF10415P |
| 10420 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen33896ORF10415P |
| 10425 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22735 | 217 aa hypothetical protein | |||
| 22740 | M | M.Sens29958ORF6205P (100% identity) | M.Sen33896ORF22740P | |
| 22745 | 221 aa hypothetical protein | |||
| 2305 | ribulose phosphate epimerase | |||
| 2310 | M | M.StyTDamP (100% identity) | GATC | M.Sen33896DamP |
| 2315 | cell division protein DamX | |||
| 13545 | DNA repair protein | |||
| 13550 | RM | StyUK1IV (100% identity) | GATCAG | Sen33896ORF13550P |
| 13555 | 363 aa hypothetical protein | |||
| 20320 | Fis family transcriptional regulator | |||
| 20325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33896ORF20325P |
| 20330 | 54 aa hypothetical protein | |||
| 9305 | hydrolase | |||
| 9310 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33896DcmP |
| 9315 | V | V.StyUK1DcmP (100% identity) | V.Sen33896DcmP | |
| 9320 | multidrug DMT transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4960 | 33 aa hypothetical protein | |||
| 4965 | R | StyUK1IP (99% identity) | CAGAG | Sen33896ORF4970P |
| 4970 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33896ORF4970P |
| 4975 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10420 | DEAD/DEAH box helicase | |||
| 10425 | R | StyUK1MrrP (100% identity) | Sen33896MrrP | |
| 10430 | 95 aa hypothetical protein | |||