Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033859 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium CFSAN033859 RM systems
Ref: Timme,R. et al. unpublished
REBASE ref # 22799
Contig set: 5,134,739 bp
GenBank #: LUJG00000000 (NZ_LUJG00000000)
REBASE acronym: Sen33859
Org_num: 21340
All begin AIZ04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24070 | R | DEAD/DEAH box helicase | TGANNNNNNCTTC | Sen33859ORF24075P |
| 24075 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen33859ORF24075P |
| 24080 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen33859ORF24075P |
| 24085 | 540 aa hypothetical protein | |||
| 6900 | restriction endonuclease | |||
| 6905 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen33859ORF6910P |
| 6910 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen33859ORF6910P |
| 6915 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen33859ORF6910P |
| 6920 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5795 | crossover junction endodeoxyribonuclease | |||
| ??? | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen33859ORF5800P |
| 5805 | 157 aa hypothetical protein | |||
| 22590 | ribulose phosphate epimerase | |||
| 22595 | M | M.StyTDamP (100% identity) | GATC | M.Sen33859DamP |
| 22600 | cell division protein DamX | |||
| 24260 | 146 aa hypothetical protein | |||
| 24265 | M | M.Sen7563ORF16315P (100% identity) | GATC | M.Sen33859ORF24265P |
| 24270 | 72 aa hypothetical protein | |||
| 20425 | 54 aa hypothetical protein | |||
| 20430 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen33859ORF20430P |
| 20435 | Fis family transcriptional regulator | |||
| 16045 | 75 aa hypothetical protein | |||
| 16050 | M | M.Sen33859ORF16380P (100% identity) | M.Sen33859ORF16050P | |
| 16055 | holin | |||
| 22335 | 79 aa hypothetical protein | |||
| 22340 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen33859ORF22340P |
| 22345 | exonuclease | |||
| 21210 | multidrug DMT transporter | |||
| 21215 | V | V.StyUK1DcmP (100% identity) | V.Sen33859DcmP | |
| 21220 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen33859DcmP |
| 21225 | hydrolase | |||
| 7070 | DNA repair protein | |||
| 7075 | RM | StyUK1IV (100% identity) | GATCAG | Sen33859ORF7075P |
| 7080 | 363 aa hypothetical protein | |||
| 16375 | holin | |||
| 16380 | M | M.Sen33859ORF16050P (100% identity) | M.Sen33859ORF16380P | |
| 16385 | 75 aa hypothetical protein | |||
| 15880 | 207 aa hypothetical protein | |||
| 15885 | M | M.Sen33866ORF7530P (100% identity) | GATC | M.Sen33859ORF15885P |
| 15890 | 59 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12675 | 33 aa hypothetical protein | |||
| 12680 | R | StyUK1IP (99% identity) | CAGAG | Sen33859ORF12685P |
| 12685 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen33859ORF12685P |
| 12690 | pseudogene | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6895 | 95 aa hypothetical protein | |||
| 6900 | R | StyUK1MrrP (100% identity) | Sen33859MrrP | |
| 6905 | DEAD/DEAH box helicase | |||