Salmonella enterica subsp. enterica serovar Thompson STh01 |
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Putative Salmonella enterica subsp. enterica serovar Thompson STh01 RM systems
Ref: Ronholm,J. et al. unpublished
REBASE ref # 22795
Contig set: 4,758,749 bp
GenBank #: MATH00000000 (NZ_MATH00000000)
REBASE acronym: SenSth01
Org_num: 21334
All begin BBC53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15140 | 106 aa hypothetical protein | |||
| 15145 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.SenSth01ORF15150P |
| 15150 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.SenSth01ORF15150P |
| 15155 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | SenSth01ORF15150P |
| 15160 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | Fis family transcriptional regulator | |||
| 1825 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenSth01ORF1825P |
| 1830 | DUF2556 domain-containing protein | |||
| 12325 | drug/metabolite exporter YedA | |||
| 12330 | V | V.StyUK1DcmP (100% identity) | V.SenSth01DcmP | |
| 12335 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenSth01DcmP |
| 12340 | phosphohydrolase | |||
| 17020 | 174 aa hypothetical protein | |||
| 17025 | M | M.StyTORF1914P (100% identity) | M.SenSth01ORF17025P | |
| 17030 | 70 aa hypothetical protein | |||
| 11760 | cell division protein DamX | |||
| 11765 | M | M.StyTDamP (100% identity) | GATC | M.SenSth01DamP |
| 11770 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7170 | 33 aa hypothetical protein | |||
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | SenSth01ORF7180P |
| 7180 | M | M.Spy5740II (100% identity) | CAGAG | M.SenSth01ORF7180P |
| 7185 | sugar transporter | |||