Clostridium species W14A |
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Putative Clostridium species W14A RM systems
Ref: Ransom-Jones,E. and Mcdonald,J.E. unpublished
REBASE ref # 22791
Contig set: 3,822,631 bp
GenBank #: MBSV00000000 (NZ_MBSV00000000)
REBASE acronym: CspW14A
Org_num: 21612
All begin A7X67_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17105 | 88 aa hypothetical protein | |||
| 17110 | M | M.Csp7D4C2ORF14375P (69% identity) | M.CspW14AORF17110P | |
| 17115 | 135 aa hypothetical protein | |||
| 10555 | 188 aa hypothetical protein | |||
| 10560 | M | M.Csp7D4C2ORF14375P (94% identity) | M.CspW14AORF10560P | |
| 10565 | 89 aa hypothetical protein | |||
| 8990 | 274 aa hypothetical protein | |||
| 8995 | M | M.Cjo17888ORFMP (56% identity) | M.CspW14AORF8995P | |
| 9000 | RM | Cjo17888ORFMP (60% identity) | CspW14AORF8995P | |
| 9005 | succinate dehydrogenase | |||
| 12395 | AbrB family transcriptional regulator | |||
| 12400 | M | M.CspW14AORF13220P (76% identity) | M.CspW14AORF12400P | |
| 12405 | 60 aa hypothetical protein | |||
| 2325 | 85 aa hypothetical protein | |||
| 2330 | M | M.DhaPCSSORF121P (75% identity) | M.CspW14AORF2330P | |
| 2335 | DUF4406 domain-containing protein | |||
| 4445 | 76 aa hypothetical protein | |||
| 4450 | M | M.Ova1820ORF42640P (70% identity) | M.CspW14AORF4450P | |
| 4455 | 88 aa hypothetical protein | |||
| 5170 | 110 aa hypothetical protein | |||
| 5175 | M | M.DhaPCSSORF151P (95% identity) | M.CspW14AORF5175P | |
| 5180 | 190 aa hypothetical protein | |||
| 10940 | 286 aa hypothetical protein | |||
| 10945 | M | M.Lde26046ORF6600P (74% identity) | GAGCTC | M.CspW14AORF10945P |
| 10950 | 171 aa hypothetical protein | |||
| 10955 | R | PbaDCMFORF19915P (55% identity) | CspW14AORF10945P | |
| 10960 | 67 aa hypothetical protein | |||
| 6230 | 114 aa hypothetical protein | |||
| 6235 | M | M.Oba18003ORF13145P (97% identity) | M.CspW14AORF6235P | |
| 6240 | 222 aa hypothetical protein | |||
| 13215 | 71 aa hypothetical protein | |||
| 13220 | M | M.CspW14AORF12400P (76% identity) | M.CspW14AORF13220P | |
| 13225 | AbrB family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18135 | 272 aa hypothetical protein | |||
| 18140 | R | Ssp5C1ORF15740P (80% identity) | CspW14AORF18145P | |
| 18145 | M | M.SspJS71ORF1225P (53% identity) | M.CspW14AORF18145P | |
| 18150 | 566 aa hypothetical protein | |||
| 6260 | bifunctional 3-5 exonuclease/DNA polymerase | |||
| 6265 | M | M.PmeBin496ORFDP (62% identity) | M.CspW14AORF6265P | |
| 6270 | R | PmeBin221ORFFP (77% identity) | CspW14AORF6265P | |
| 6275 | 640 aa hypothetical protein | |||