Helicobacter suis SNTW101 |
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Putative Helicobacter suis SNTW101 RM systems
Ref: Matsui,H. et al. unpublished
REBASE ref # 22746
Contig set: 1,634,004 bp
GenBank #: BDAO00000000 (NZ_BDAO00000000)
REBASE acronym: Hsu101
Org_num: 21209
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26 | 332 aa hypothetical protein | |||
| 27 | M | M.Hsu101cORF7690P (97% identity) | M.Hsu101ORFKP | |
| 28 | S | S.Hsu101cORF7690P (100% identity) | S.Hsu101ORFKP | |
| 29 | R | Hsu4022ORF4640P (100% identity) | Hsu101ORFKP | |
| 31 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase | |||
| 32 | 66 aa hypothetical protein | |||
| 33 | S | S.Hsu0020ORF11870P (100% identity) | S.Hsu101ORFDP | |
| ??? | M | M.Hsu101cORF9840P (100% identity) | M.Hsu101ORFDP | |
| 37 | S-ribosylhomocysteine lyase | |||
| 118 | 900 aa hypothetical protein | |||
| 120 | S | S.HsuHS1ORF12580P (100% identity) | S.Hsu101ORFGP | |
| 121 | transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | fumarate hydratase | |||
| 2 | M | M.HsuHS1ORF3730P (100% identity) | CCGG | M.Hsu101ORFA1P |
| 4 | 84 aa hypothetical protein | |||
| 6 | 770 aa hypothetical protein | |||
| 7 | M | M.HsuHS1ORF18000P (100% identity) | GATC | M.Hsu101ORFZP |
| 9 | molybdenum cofactor guanylyltransferase | |||
| 6 | 239 aa hypothetical protein HAL011_06630 | |||
| 8 | R | Hsu4022ORF4350P (100% identity) | GANTC | Hsu101ORFYP |
| 9 | M | M.Hsu4022ORF4350P (100% identity) | GANTC | M.Hsu101ORFYP |
| 10 | polyisoprenoid-binding protein | |||
| 9 | shikimate kinase | |||
| 10 | M | M1.HsuHS1ORF9300P (100% identity) | GCATC | M1.Hsu101ORFVP |
| 11 | M | M2.HsuHS1ORF9300P (94% identity) | GCATC | M2.Hsu101ORFVP |
| 12 | R | Hsu101cORF11240P (100% identity) | GCATC | Hsu101ORFVP |
| 14 | phosphate acetyltransferase | |||
| 11 | membrane protein | |||
| 13 | M | M.Hsu4022ORF2850P (100% identity) | CCNNGG | M.Hsu101ORFWP |
| 14 | R | Hsu101cORF2840P (97% identity) | CCNNGG | Hsu101ORFWP |
| 15 | 67 aa hypothetical protein | |||
| 30 | chemotaxis protein | |||
| 31 | M | HsuHS1ORF9820P (100% identity) | M.Hsu101ORFXP | |
| 32 | 66 aa hypothetical protein | |||
| 37 | 87 aa hypothetical protein | |||
| 39 | M | M.HsuHS1ORF4820P (100% identity) | M.Hsu101ORFTP | |
| 40 | phage head morphogenesis protein, partial | |||
| 48 | 110 aa hypothetical protein | |||
| 50 | M | M.Hsu101cORF10640P (100% identity) | M.Hsu101ORFSP | |
| 51 | DNA methyltransferase | |||
| 45 | 142 aa hypothetical protein | |||
| 46 | RM | Hsu101cORF1410P (98% identity) | Hsu101ORFUP | |
| 47 | glucose-6-phosphate isomerase | |||
| 56 | 1-deoxy-D-xylulose-5-phosphate synthase | |||
| 57 | M | M.Hsu101cORF2160P (100% identity) | M.Hsu101ORFQP | |
| 58 | 638 aa hypothetical protein | |||
| 64 | ABC transporter ATP-binding protein | |||
| 66 | R | Hsp1614ORF10235P (38% identity) | GATATC | Hsu101ORFRP |
| 67 | 64 aa hypothetical protein | |||
| 68 | M | M.Hsu101cORF2250P (100% identity) | GATATC | M.Hsu101ORFRP |
| 70 | phosphatidylglycerophosphatase A | |||
| 67 | 72 aa hypothetical protein | |||
| 69 | M | M.Hsu101cORF3700P (85% identity) | CCWGG | M.Hsu101ORFIP |
| 70 | 134 aa hypothetical protein HSUHS5_0517 | |||
| 70 | 134 aa hypothetical protein HSUHS5_0517 | |||
| 71 | R | Hpy1768ORFKP (31% identity) | GGNCC | Hsu101ORFJP |
| 72 | tRNA 2-thiocytidine synthetase TtcA | |||
| 140 | 121 aa hypothetical protein | |||
| ??? | M | M.Hsu4022ORF1200P (100% identity) | M.Hsu101ORFPP | |
| 143 | 287 aa hypothetical protein U468_06930 | |||
| 162 | selenocysteine-specific translation elongation factor | |||
| 164 | M | M.HsuHS1ORF1490P (97% identity) | CATG | M.Hsu101ORFLP |
| 165 | type I restriction-modification system,DNA-methyltransferase subunit M | |||
| 196 | NADPH dehydrogenase | |||
| 197 | M | M.Hsu101cORF13960P (100% identity) | ACNGT | M.Hsu101ORFEP |
| 198 | R | type II restriction endonuclease | ACNGT | Hsu101ORFEP |
| 199 | 209 aa hypothetical protein | |||
| 294 | shikimate dehydrogenase | |||
| 295 | M | M.HsuHS1ORF7680P (100% identity) | GTAC | M.Hsu101ORFAP |
| 296 | R | Hsu101cORF15800P (100% identity) | GTAC | Hsu101ORFAP |
| 297 | DNA polymerase III | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 122 | 78 aa hypothetical protein | |||
| 123 | M | M.Hsu101cORF1070P (99% identity) | M.Hsu101ORFNP | |
| 124 | threonine transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7 | 76 aa hypothetical protein | |||
| 8 | R | HsuHS1McrBP (100% identity) | Hsu101McrBP | |
| 10 | R | HsuHS1McrCP (100% identity) | Hsu101McrCP | |
| 11 | 85 aa hypothetical protein | |||