Escherichia coli NB8 |
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Putative Escherichia coli NB8 RM systems
Ref: Weng,X. unpublished
REBASE ref # 22741
Contig set: 5,117,455 bp
GenBank #: LBIS00000000 (NZ_LBIS00000000)
REBASE acronym: EcoNB8
Org_num: 21228
All begin CR63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25525 | M | M.SenceORFJP (92% identity) | M.EcoNB8ORF25525P | |
| 25530 | antitoxin | |||
| 24960 | restriction endonuclease | |||
| 24965 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoNB8ORF24965P |
| 24970 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoNB8ORF24965P |
| 24975 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoNB8ORF24965P |
| 24980 | endoribonuclease SymE | |||
| 23575 | addiction module antitoxin | |||
| 23580 | M | M.SenS0935ORF770P (99% identity) | M.EcoNB8ORF23580P | |
| 23585 | S | S.Ecos53ORF20340P (100% identity) | S.EcoNB8ORF23580P | |
| 23590 | R | EcoC0305ORF21040P (100% identity) | EcoNB8ORF23580P | |
| 23595 | membrane protein | |||
| 21850 | endoribonuclease SymE | |||
| 21855 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoNB8ORF21865P |
| 21860 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoNB8ORF21865P |
| 21865 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoNB8ORF21865P |
| 21870 | restriction endonuclease | |||
| 1325 | 156 aa hypothetical protein | |||
| 1330 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoNB8ORF1335P |
| 1335 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoNB8ORF1335P |
| 1340 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoNB8ORF1335P |
| 1345 | 260 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25175 | 103 aa hypothetical protein | |||
| 25180 | M | M.UbapRSB107ORFAP (100% identity) | M.EcoNB8ORF25180P | |
| 25185 | 73 aa hypothetical protein | |||
| 24480 | DNA-binding protein | |||
| 24485 | M | M.KpnYN1ORFGP (89% identity) | M.EcoNB8ORF24485P | |
| 24490 | 71 aa hypothetical protein | |||
| 23895 | TrmB family transcriptional regulator | |||
| 23900 | M | M.EcosS9ORF10680P (100% identity) | M.EcoNB8ORF23900P | |
| 23915 | 108 aa hypothetical protein | |||
| 21490 | transposase | |||
| 21495 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoNB8ORF21495P |
| ??? | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoNB8ORF21495P |
| 21505 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoNB8ORF21495P |
| 21510 | restriction endonuclease | |||
| 6410 | TrmB family transcriptional regulator | |||
| 6415 | M | M.EcosS9ORF10680P (100% identity) | M.EcoNB8ORF6415P | |
| 6430 | 108 aa hypothetical protein | |||
| 16335 | Fis family transcriptional regulator | |||
| 16340 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoNB8ORF16340P |
| 16345 | 59 aa hypothetical protein | |||
| 16940 | ribulose-phosphate 3-epimerase | |||
| 16945 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoNB8DamP |
| 16950 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21505 | restriction endonuclease | |||
| 21510 | R | EcosS9McrCP (100% identity) | EcoNB8McrCP | |
| 21515 | R | EcosS3McrBP (100% identity) | EcoNB8McrBP | |
| 21520 | glycosyl transferase | |||