Ref: Chain,P.S. et al. Proc. Natl. Acad. Sci. U.S.A. 101 (38), 13826-13831 (2004)

REBASE ref # 8697

Complete sequence: 4,744,671 bp

GenBank #: BX936398 (NC_006155)

REBASE acronym: YpsA

Org_num: 3981

 

All begin YPTB

Type I
ORF Gene Most similar Specificity Name
 
534 integrase pseudogene
535 R type I restriction enzyme, R subunit CYGANNNNNNCTG YpsAIP
536 S type I restriction enzyme, S subunit CYGANNNNNNCTG S.YpsAI
537 M type I restriction-modification system, CYGANNNNNNCTG M.YpsAI
538 M48 peptidase family protein
 
3878 predicted metal-dependent hydrolase
3879 R possible type I restriction enzyme (restriction TGACNNNNNCTC YpsAIIP
3880 348 aa conserved hypothetical protein
3881 S possible restriction modification enzyme TGACNNNNNCTC S.YpsAII
3882 M type I site-specific deoxyribonuclease TGACNNNNNCTC M.YpsAII
3883 192 aa hypothetical
Type II
ORF Gene Most similar Specificity Name
 
1796 115 aa hypothetical protein
1797 M M.Ysi228ORF18130P (1% identity) CCCGGG M.YpsAORF1797P
1798 291 aa conserved hypothetical protein
 
1798 291 aa conserved hypothetical protein
1799 M M.YpsI2ORF17850P (0% identity) M.YpsAORF1799P
1800 conserved putative phage protein
 
3746 ribulose-phosphate 3-epimerase
3747 M M.Ysi228DamP (1% identity) GATC M.YpsADam
3748 329 aa conserved hypothetical protein
Orphan M
ORF Gene Most similar Specificity Name
 
1797 DNA methyltransferase
1798 M M.Ysi228ORF18135P (1% identity) GATC M.YpsAORF1798P
1799 modification methylase
 
1862 phage replication protein
1863 M M.YpsMD67ORF1128P (1% identity) GATC M.YpsAORF1863P
1864 similar to Orf81 bacteriophage 186