Flavobacterium psychrophilum OSU THCO2-90 |
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Putative Flavobacterium psychrophilum OSU THCO2-90 RM systems
Ref: Loux,V. and Rue,O. unpublished
REBASE ref # 23282
Complete sequence: 2,783,852 bp
GenBank #: LT670843
REBASE acronym: Fps290
Org_num: 21187
All begin THC0290_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 509 | virulence-associated E family protein | |||
| 510 | M | M.FpsTRORFNP (100% identity) | M.Fps290ORF510P | |
| 511 | S | S.FpsTRORFNP (100% identity) | S.Fps290ORF510P | |
| 512 | Protein of unknown function | |||
| 513 | R | FpsTRORFNP (100% identity) | Fps290ORF510P | |
| 514 | Protein of unknown function | |||
| 1121 | Probable transposase | |||
| 1122 | M | M.FpsTRORFHP (100% identity) | M.Fps290ORF1122P | |
| 1123 | Protein of unknown function | |||
| 1124 | Protein of unknown function | |||
| 1125 | S | S.FpsTRORFHP (100% identity) | S.Fps290ORF1122P | |
| 1126 | Protein of unknown function | |||
| 1704 | 78 aa Hypothetical transmembrane protein | |||
| 1705 | M | M.FpsTRORFEP (100% identity) | M.Fps290ORF1705P | |
| 1706 | 239 aa Hypothetical protein | |||
| 1707 | S | S.FpsTRORFEP (100% identity) | S.Fps290ORF1705P | |
| 1708 | 227 aa Hypothetical protein | |||
| 1709 | Protein of unknown function | |||
| 1710 | R | FpsTRORFEP (100% identity) | Fps290ORF1705P | |
| 1711 | Probable penicillin-binding protein precursor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | 3-oxoacid CoA-transferase subunit A family | |||
| 36 | RM | FpsTRORFCP (100% identity) | Fps290ORF36P | |
| 37 | 3-oxoacid CoA-transferase subunit B family | |||
| 251 | Protein of unknown function | |||
| 252 | RM | FpsTRORFBP (100% identity) | Fps290ORF252P | |
| 253 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 479 | IS3 family transposase | |||
| 480 | M | M.FpsTRI (100% identity) | GATATC | M.Fps290ORF480P |
| ??? | R | FpsTRIP (100% identity) | GATATC | Fps290ORF480P |
| 482 | Transposase IS1182 family | |||
| 545 | 198 aa Hypothetical protein | |||
| 546 | R | FpsTRORFMP (100% identity) | GCNGC | Fps290ORF547P |
| ??? | M | M.FpsTRORFMBP (100% identity) | GCNGC | M.Fps290ORF547BP |
| 548 | Protein of unknown function | |||
| ??? | M | M.FpsTRORFMAP (100% identity) | GCNGC | M.Fps290ORF547AP |
| 550 | Protein of unknown function | |||
| 554 | 350 aa Hypothetical protein precursor | |||
| 555 | R | FpsTRORFKP (100% identity) | GATC | Fps290ORF556P |
| 556 | M | M.FpsTRORFKP (100% identity) | GATC | M.Fps290ORF556P |
| 557 | C | C.FspM31R6ORF8720P (100% identity) | C.Fps290ORF556P | |
| 558 | Protein of unknown function | |||
| 566 | 303 aa Hypothetical transmembrane protein | |||
| 567 | M | M.FpsTRORFLP (100% identity) | GTMKAC | M.Fps290ORF567P |
| 568 | R | FpsTRORFLP (100% identity) | GTMKAC | Fps290ORF567P |
| 569 | Protein of unknown function | |||
| 576 | Transposase IS3 family | |||
| 577 | R | FpsTRORFJP (100% identity) | Fps290ORF578P | |
| 578 | M | M.FpsTRORFJP (100% identity) | GAATTC | M.Fps290ORF578P |
| 579 | Integrase/recombinase | |||
| 747 | Protein of unknown function | |||
| 748 | M | M.FpsTRORFIP (100% identity) | GGNCC | M.Fps290ORF748P |
| 749 | R | FpsTRORFIP (100% identity) | GGNCC | Fps290ORF748P |
| 750 | Probable DnaJ-class molecular chaperone | |||
| 1429 | aminotransferase | |||
| 1430 | RM | FpsTRORFGP (100% identity) | Fps290ORF1430P | |
| 1431 | Probable transmembrane protein of unknown | |||
| 1510 | 216 aa hypothetical protein | |||
| 1511 | RM | FpsTRORFFP (100% identity) | Fps290ORF1511P | |
| 1512 | 72 aa hypothetical protein | |||
| 2136 | 216 aa Hypothetical lipoprotein precursor | |||
| 2137 | R | FpsTRORFDP (100% identity) | Fps290ORF2138P | |
| 2138 | M | M.FpsTRORFDP (100% identity) | M.Fps290ORF2138P | |
| 2139 | Mannose-1-phosphate guanylyltransferase (GDP) | |||