Putative Xylella fastidiosa Hib4 RM systems
Ref: Pierry,P.M. and da Silva,A.M. unpublished
REBASE ref # 23279
Complete sequence: 2,813,297 bp
GenBank #: CP009885
REBASE acronym: XfaHib4
Org_num: 21181
All begin XFHB_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1215 | metal-dependent hydrolase | |||
??? | R | XfaXf6cORF1300P (84% identity) | XfaHib4ORF1245P | |
1235 | pseudogene | |||
1240 | S | S.Xfa12ORF1280P (99% identity) | S.XfaHib4ORF1245P | |
??? | M | M.Xfa3124ORF12650P (99% identity) | M.XfaHib4ORF1245P | |
1255 | 68 aa hypothetical protein | |||
12615 | 94 aa hypothetical protein | |||
12620 | R | XfaORF2723P (91% identity) | XfaHib4ORF12630P | |
12625 | S | S.Xfa12ORF12570P (99% identity) | S.XfaHib4ORF12630P | |
12630 | M | M.XfaFb7ORF9875P (97% identity) | M.XfaHib4ORF12630P | |
12635 | HNH endonuclease | |||
12635 | 234 aa hypothetical protein Xfasm12_2270 | |||
12640 | R | Xfa12ORF12595P (0% identity) | XfaHib4ORF12655P | |
12645 | S | S.XfaXf32ORF12335P (0% identity) | S.XfaHib4ORF12655P | |
12650 | 92 aa hypothetical protein | |||
12655 | M | M.Xfa12ORF12595P (0% identity) | M.XfaHib4ORF12655P | |
12660 | 64 aa hypothetical protein | |||
14030 | 80 aa hypothetical protein | |||
12705 | R | Xfa12ORF12655P (98% identity) | XfaHib4ORF12720P | |
12710 | 181 aa hypothetical protein | |||
12715 | S | S.Xfa081ORF11085P (96% identity) | S.XfaHib4ORF12720P | |
12720 | M | M.XfaXf6cORF12180P (99% identity) | M.XfaHib4ORF12720P | |
12725 | 137 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2610 | 80 aa hypothetical protein | |||
2615 | R | XfaY3CORF8005P (100% identity) | CGTACG | XfaHib4ORF2620P |
2620 | M | M.XfaXf6cORF2780P (100% identity) | CGTACG | M.XfaHib4ORF2620P |
2630 | peptidylprolyl isomerase | |||
3490 | peptidase | |||
3495 | M | M.XfaXf32ORF4255P (97% identity) | M.XfaHib4ORF3495P | |
3500 | 79 aa hypothetical protein B398_03460 | |||
3565 | phosphotyrosine protein phosphatase | |||
3570 | M | M.Xfa12ORF3575P (98% identity) | M.XfaHib4ORF3570P | |
3575 | 470 aa hypothetical protein | |||
4955 | transcriptional regulator | |||
4960 | R | XfaCO33ORF9800P (99% identity) | CGGCCG | XfaHib4ORF4965P |
4965 | M | M.XfaCO33ORF9800P (99% identity) | CGGCCG | M.XfaHib4ORF4965P |
4970 | 73 aa hypothetical protein | |||
6295 | pseudogene | |||
??? | M | M.XfaXf6cORF5915P (96% identity) | GCATGC | M.XfaHib4ORF6300P |
6305 | 190 aa hypothetical protein | |||
6930 | 185 aa hypothetical protein | |||
6935 | M | M.PaeF045ORF8210P (98% identity) | M.XfaHib4ORF6935P | |
6940 | DNA topoisomerase III | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
5520 | 3-oxoacyl-ACP synthase | |||
5525 | M | M.Xfa12ORF9975P (100% identity) | M.XfaHib4ORF5525P | |
5530 | R | Xfa12ORF9975P (98% identity) | XfaHib4ORF5525P | |
5535 | pseudogene |