Xylella fastidiosa Pr8x |
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Putative Xylella fastidiosa Pr8x RM systems
Ref: Pierry,P.M. and da Silva,A.M. unpublished
REBASE ref # 23279
Complete sequence: 2,666,240 bp
GenBank #: CP009826
REBASE acronym: XfaPr8
Org_num: 21179
All begin XFPR_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1245 | M48 family metallopeptidase | |||
| 12275 | R | XfaXf6cORF1300P (100% identity) | XfaPr8ORF1275P | |
| 1270 | S | S.XfaXf6cORF1300P (97% identity) | S.XfaPr8ORF1275P | |
| ??? | M | M.XfaXf6cORF1300P (100% identity) | M.XfaPr8ORF1275P | |
| 1285 | 68 aa hypothetical protein | |||
| 13045 | 104 aa hypothetical protein | |||
| 11595 | R | XfaXf6cORF12080P (99% identity) | XfaPr8ORF11605P | |
| 11600 | S | S.XfaXf6cORF12080P (100% identity) | S.XfaPr8ORF11605P | |
| 11605 | M | M.XfaXf6cORF12080P (100% identity) | M.XfaPr8ORF11605P | |
| 11610 | HNH endonuclease | |||
| 11610 | HNH endonuclease | |||
| 11615 | R | XfaXf6cORF12105P (100% identity) | XfaPr8ORF11630P | |
| 11620 | S | S.XfaXf6cORF12105P (100% identity) | S.XfaPr8ORF11630P | |
| 11625 | 92 aa hypothetical protein | |||
| 11630 | M | M.XfaXf6cORF12105P (100% identity) | M.XfaPr8ORF11630P | |
| 11640 | LysE family translocator | |||
| 13055 | 94 aa hypothetical protein | |||
| 11690 | R | XfaXf6cORF12180P (100% identity) | XfaPr8ORF11705P | |
| 13060 | 206 aa hypothetical protein | |||
| 11700 | S | S.XfaXf6cORF12180P (100% identity) | S.XfaPr8ORF11705P | |
| 11705 | M | M.XfaXf6cORF12180P (100% identity) | M.XfaPr8ORF11705P | |
| 13065 | 74 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12355 | 60 aa hypothetical protein | |||
| 1840 | M | M.XfaXf6cORF1905P (100% identity) | M.XfaPr8ORF1840P | |
| 1845 | NgoMIV family type II restriction endonuclease | |||
| 1840 | DNA adenine methylase | |||
| 1845 | R | XfaXf6cORF1910P (100% identity) | GCCGGC | XfaPr8ORF1850P |
| 1850 | M | M.XfaXf6cORF1910P (96% identity) | GCCGGC | M.XfaPr8ORF1850P |
| 1855 | HigA family addiction module antidote protein | |||
| 12420 | 68 aa hypothetical protein | |||
| 2640 | R | XfaY3CORF8005P (100% identity) | CGTACG | XfaPr8ORF2645P |
| 2645 | M | M.XfaXf6cORF2780P (100% identity) | CGTACG | M.XfaPr8ORF2645P |
| 2655 | FKBP-type peptidyl-prolyl cis-trans isomerase | |||
| 3505 | lysozyme | |||
| 3510 | M | M.XfaORF2313P (99% identity) | M.XfaPr8ORF3510P | |
| 3515 | 76 aa hypothetical protein | |||
| 3580 | low molecular weight phosphotyrosine protein | |||
| 3585 | M | M.XfaFb7ORF6005P (100% identity) | M.XfaPr8ORF3585P | |
| 3590 | 71 aa hypothetical protein | |||
| 12700 | 47 aa hypothetical protein | |||
| 5545 | M | M.XfaXf6cORF5915P (100% identity) | GCATGC | M.XfaPr8ORF5545P |
| 5550 | Ax21 family protein | |||
| 5685 | DNA topoisomerase III | |||
| 5690 | M | M.Xfa3124ORF6245AP (100% identity) | M.XfaPr8ORF5690AP | |
| 5695 | group II intron reverse transcriptase/maturase | |||
| ??? | M | M.XfaXf6cORF6085P (100% identity) | M.XfaPr8ORF5690BP | |
| 5705 | 185 aa hypothetical protein | |||
| 5695 | pseudogene | |||
| ??? | M | M.XfaXf6cORF6085P (100% identity) | M.XfaPr8ORF5700P | |
| 5705 | 185 aa hypothetical protein | |||
| 9675 | lysozyme | |||
| 9680 | M | M.XfaXf6cORF10010P (100% identity) | M.XfaPr8ORF9680P | |
| 9685 | 232 aa hypothetical protein | |||
| 9970 | outer membrane protein assembly factor BamD | |||
| 9975 | R | XfaFb7ORF5325P (100% identity) | XfaPr8ORF9980P | |
| 9980 | M | M.XfaXf6cORF10320P (100% identity) | M.XfaPr8ORF9980P | |
| 9985 | 83 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4825 | 3-oxoacyl-ACP synthase III | |||
| 4830 | M | M.XfaXf6cORF5105P (100% identity) | M.XfaPr8ORF4830P | |
| 4835 | R | XfaXf6cORF5105P (100% identity) | XfaPr8ORF4830P | |
| 4840 | alpha/beta fold hydrolase | |||