Xylella fastidiosa U24D |
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Putative Xylella fastidiosa U24D RM systems
Ref: da Silva,A.M. and Santana,W.O. unpublished
REBASE ref # 23277
Complete sequence: 2,681,334 bp
GenBank #: CP009790
REBASE acronym: Xfa24
Org_num: 21177
All begin XFUD_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1250 | metal-dependent hydrolase | |||
| ??? | R | Xfa7AORF1240P (97% identity) | Xfa24ORF1275P | |
| ??? | S | S.XfaXf6cORF1300P (100% identity) | S.Xfa24ORF1275P | |
| ??? | M | M.XfaORF297P (100% identity) | M.Xfa24ORF1275P | |
| 1285 | 68 aa hypothetical protein | |||
| 11815 | pseudogene | |||
| ??? | R | XfaORF2723P (100% identity) | Xfa24ORF11830P | |
| ??? | S | S.XfaORF2723P (100% identity) | S.Xfa24ORF11830P | |
| ??? | M | M.XfaORF2723P (100% identity) | M.Xfa24ORF11830P | |
| 11835 | 233 aa hypothetical protein | |||
| 11835 | 233 aa hypothetical protein | |||
| 11840 | R | XfaORF2728P (100% identity) | Xfa24ORF11855P | |
| 11845 | S | S.XfaORF2728P (100% identity) | S.Xfa24ORF11855P | |
| 11850 | pseudogene | |||
| 11855 | M | M.XfaORF2728P (100% identity) | M.Xfa24ORF11855P | |
| 11860 | threonine transporter RhtB | |||
| 11895 | 66 aa hypothetical protein | |||
| ??? | R | XfaORF2742P (100% identity) | Xfa24ORF11915P | |
| 11905 | 210 aa hypothetical protein | |||
| ??? | S | S.XfaORF2742P (100% identity) | S.Xfa24ORF11915P | |
| 11915 | M | M.XfaORF2742P (100% identity) | M.Xfa24ORF11915P | |
| 11920 | pseudogene | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2670 | 80 aa hypothetical protein | |||
| 2675 | R | XfaORF641P (100% identity) | CGTACG | Xfa24ORF2680P |
| 2680 | M | M.XfaXf32ORF2530P (100% identity) | CGTACG | M.Xfa24ORF2680P |
| 2690 | peptidylprolyl isomerase | |||
| 4010 | 83 aa hypothetical protein | |||
| 4015 | M | M.XfaXf6cORF10320P (100% identity) | M.Xfa24ORF4015P | |
| 4020 | R | XfaPr8ORF9980P (100% identity) | Xfa24ORF4015P | |
| 4025 | competence protein | |||
| 7640 | 185 aa hypothetical protein | |||
| ??? | M | M.XfaXf6cORF6085P (100% identity) | M.Xfa24ORF7645P | |
| 7650 | pseudogene | |||
| 7795 | 190 aa hypothetical protein | |||
| 7800 | M | M.XfaXf6cORF5915P (94% identity) | GCATGC | M.Xfa24ORF7800P |
| 7805 | pseudogene | |||
| 9975 | 470 aa hypothetical protein | |||
| 9980 | M | M.Xfa7AORF3600P (98% identity) | M.Xfa24ORF9980P | |
| 9985 | phosphotyrosine protein phosphatase | |||
| 10050 | pseudogene | |||
| 10055 | M | M.XfaORF2313P (100% identity) | M.Xfa24ORF10055P | |
| 10060 | peptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8525 | alpha/beta hydrolase | |||
| 8530 | R | XfaORF1968P (100% identity) | Xfa24ORF8535P | |
| 8535 | M | M.XfaORF1968P (100% identity) | M.Xfa24ORF8535P | |
| 8540 | 3-oxoacyl-ACP synthase | |||