Vibrio cholerae E506 |
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Putative Vibrio cholerae E506 RM systems
Ref: Hu,D. et al. Proc. Natl. Acad. Sci. U.S.A. (2016) In press
REBASE ref # 23207
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,969,901 bp | CP013307 |
| chromosome 2: | 1,092,607 bp | CP013308 |
REBASE acronym: Vch506
Org_num: 21058
All begin ASZ84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1330 | 706 aa hypothetical protein | |||
| 1331 | R | VspNIH41ORF1746P (100% identity) | Vch506ORF1335P | |
| 1332 | 663 aa hypothetical protein | |||
| 1333 | 470 aa hypothetical protein | |||
| ??? | S | S.VchV52ORF8545P (100% identity) | S.Vch506ORF1335P | |
| 1335 | M | M.VspNIH41ORF1746P (100% identity) | M.Vch506ORF1335P | |
| 1336 | 687 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2164 | ribulose-phosphate 3-epimerase | |||
| 2165 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch506DamP |
| 2166 | cell division protein DamX | |||
| chromosome 2 | ||||
| 2955 | GMP reductase | |||
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch506ORF2956P |
| 2957 | 638 aa hypothetical protein | |||
| 3228 | 82 aa hypothetical protein | |||
| 3229 | M | M.VspNIH41ORF3529P (94% identity) | M.Vch506ORF3229P | |
| 3230 | 44 aa hypothetical protein | |||