Clostridium botulinum CDC_67071 |
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Putative Clostridium botulinum CDC_67071 RM systems
Ref: Hill,K.K. et al. unpublished
REBASE ref # 23212
| Sequence length: | GenBank #: | |
| Chromosome: | 4,116,555 bp | CP013242 |
| plasmid pNPD7: | 235,650 bp | CP013241 |
REBASE acronym: Cbo67071
Org_num: 21070
All begin NPD7_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 948 | HNH endonuclease family protein | |||
| 949 | R | Cbo9ORF10560P (100% identity) | TAGNNNNNNCTTGY | Cbo67071IIP |
| 950 | M | M.Cbo9ORF10560P (100% identity) | TAGNNNNNNCTTGY | M.Cbo67071II |
| 951 | S | S.Cbo9ORF10560P (100% identity) | TAGNNNNNNCTTGY | S.Cbo67071II |
| 952 | 95 aa hypothetical protein | |||
| 1380 | threonine synthase | |||
| 1381 | R | Cbo9ORF8755P (100% identity) | AGTNNNNNNRTGC | Cbo67071IP |
| 1382 | S | S.Cbo9ORF8755P (100% identity) | AGTNNNNNNRTGC | S.Cbo67071I |
| 1383 | M | M.Cbo9ORF8755P (100% identity) | AGTNNNNNNRTGC | M.Cbo67071I |
| 1384 | transposase IS4 family domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1246 | phage integrase family protein | |||
| 1247 | M | M.Cbo1632ORF260P (100% identity) | M.Cbo67071ORF1247P | |
| 1248 | 147 aa hypothetical protein | |||
| 1789 | S-methyl-5-thioribose kinase | |||
| 1790 | M | M.Cbo9ORF6745P (100% identity) | M.Cbo67071ORF1790P | |
| 1791 | DNA-3-methyladenine glycosylase family protein | |||
| 2378 | 86 aa hypothetical protein | |||
| 2379 | M | M.Cbo9ORF3790P (100% identity) | CCWGG | M.Cbo67071ORF2379P |
| 2380 | histidine kinase-, DNA gyrase B-, and HSP90-like | |||
| 3792 | delta-lactam-biosynthetic de-N-acetylase | |||
| 3793 | M | M.Cbo9ORF15405P (100% identity) | CAAAAAR | M.Cbo67071III |
| 3794 | spermidine synthase | |||
| plasmid pNPD7 | ||||
| 3978 | methyltransferase domain protein | |||
| 3979 | M | M1.CboB1ORF62P (100% identity) | CTSAG | M.Cbo67071ORF3979P |
| 3980 | glycerol dehydrogenase | |||
| 3987 | 271 aa hypothetical protein | |||
| 3988 | M | M.CboB1ORF53P (100% identity) | GCNNGC | M.Cbo67071ORF3988P |
| 3989 | 158 aa hypothetical protein | |||
| 4065 | bacterial Ig-like domain family protein | |||
| 4066 | RM | Cbo1632I (100% identity) | GCRGAAG | Cbo67071IV |
| 4067 | 222 aa hypothetical protein | |||
| 4083 | 104 aa hypothetical protein | |||
| ??? | M | M.Cbo9ORF19640P (97% identity) | CCCGGG | M.Cbo67071ORF4084P |
| 4086 | 72 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2427 | NUDIX domain protein | |||
| ??? | R | Cbo9ORF3535P (100% identity) | Cbo67071ORF2428P | |
| 2430 | 222 aa hypothetical protein | |||