Citrobacter freundii A41 |
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Putative Citrobacter freundii A41 RM systems
Ref: Jagoda,S.S.Sde.S. et al. unpublished
REBASE ref # 22691
GenBank #: BDFK00000000
REBASE acronym: CfrA41
Org_num: 21033
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 111 | toxin-antitoxin system toxin component | |||
| 112 | S | S.Eco22CCORF39260P (85% identity) | S.CfrA41ORFLP | |
| 116 | M | M.Cwe2535ORFEP (99% identity) | M.CfrA41ORFLP | |
| 119 | R | SensTJX21ORF11885P (99% identity) | CfrA41ORFLP | |
| 124 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.CfrA41ORFFP (87% identity) | CGATCG | M.CfrA41ORFCP |
| 2 | 63 aa hypothetical protein | |||
| ??? | R | CfrA41ORFFP (88% identity) | CGATCG | CfrA41ORFKP |
| 5 | M | M.Sen669ORF9P (27% identity) | CGATCG | M.CfrA41ORFKP |
| 2 | M | M.CfrCF04ORFAP (72% identity) | M.CfrA41ORFBP | |
| 6 | 162 aa hypothetical protein YPPY01_4745, partial | |||
| 1 | M | M.CfrA41ORFFP (58% identity) | CGATCG | M.CfrA41ORFEP |
| 3 | 63 aa hypothetical protein | |||
| 1 | M | DNA -methyltransferase, partial | CGATCG | M.CfrA41ORFIP |
| 3 | R | KspBL05ORF40020P (97% identity) | CGATCG | CfrA41ORFIP |
| 6 | 75 aa hypothetical protein | |||
| ??? | M | M.KspBL05ORF40020P (85% identity) | CGATCG | M.CfrA41ORFDP |
| 3 | 63 aa hypothetical protein | |||
| 4 | 69 aa hypothetical protein | |||
| 5 | 172 aa hypothetical protein | |||
| 6 | MbeA | |||
| 7 | 100 aa hypothetical protein | |||
| 8 | 109 aa hypothetical protein | |||
| 9 | MbeB-like%2C N-term conserved region | |||
| 10 | 143 aa hypothetical protein | |||
| 11 | 101 aa hypothetical protein | |||
| 12 | mobilization protein MobC | |||
| 13 | 142 aa hypothetical protein | |||
| 14 | 75 aa hypothetical protein | |||
| 15 | 75 aa hypothetical protein | |||
| 16 | 60 aa hypothetical protein | |||
| 17 | R | KspBL05ORF40020P (70% identity) | CGATCG | CfrA41ORFDP |
| 1 | R | 149 aa hypothetical protein | CGATCG | CfrA41ORFHP |
| 4 | M | M.KspBL05ORF40020P (64% identity) | CGATCG | M.CfrA41ORFHP |
| 2 | 71 aa hypothetical protein | |||
| ??? | M | M.Kpns9645ORF6894P (49% identity) | CGATCG | M.CfrA41ORFJP |
| 2 | 97 aa hypothetical protein | |||
| 4 | M | M.EcosS142ORF45980P (80% identity) | M.CfrA41ORFGP | |
| 5 | 67 aa hypothetical protein | |||
| 3 | 60 aa hypothetical protein | |||
| 4 | R | Sen7695ORFEP (99% identity) | CGATCG | CfrA41ORFFP |
| 7 | M | M.Cbr1b1ORF26220P (100% identity) | CGATCG | M.CfrA41ORFFP |
| 8 | 63 aa hypothetical protein | |||
| 9 | 68 aa hypothetical protein | |||
| 13 | M | M.CspLY1ORF910P (99% identity) | M.CfrA41ORFAP | |
| 16 | 73 aa hypothetical protein | |||
| 12 | crossover junction endodeoxyribonuclease | |||
| ??? | M | M.Csp302ORFGP (99% identity) | M.CfrA41ORFRP | |
| 19 | GntR family transcriptional regulator | |||
| 76 | 68 aa hypothetical protein | |||
| 77 | M | M2.SliJL02ORF24600P (71% identity) | GATC | M.CfrA41ORFOP |
| 79 | 73 aa hypothetical protein | |||
| 156 | ribulose-phosphate 3-epimerase | |||
| 159 | M | M.CfrC431DamP (100% identity) | GATC | M.CfrA41DamP |
| 161 | protein damX | |||
| 223 | Permease of the drug/metabolite transporter superfamily | |||
| 226 | V | very short patch repair endonuclease | V.CfrA41DcmP | |
| 230 | M | M.CfrC431DcmP (100% identity) | CCWGG | M.CfrA41DcmP |
| 234 | phosphohydrolase | |||
| 490 | integrase | |||
| ??? | M | M1.RorA14ORF2075P (40% identity) | ACTGGG | M1.CfrA41ORFMP |
| ??? | M | M2.EcoSP65ORF3660P (99% identity) | ACTGGG | M2.CfrA41ORFMP |
| 495 | R | RorA14ORF2075P (100% identity) | ACTGGG | CfrA41ORFMP |
| 496 | 116 aa hypothetical protein | |||
| 611 | 75 aa hypothetical protein | |||
| 614 | M | M.Cwe616ORF9850P (100% identity) | GATC | M.CfrA41ORFPP |
| 615 | methyltransferase | |||
| 614 | DNA adenine methylase | |||
| 615 | M | M.Cwe616ORF9855P (66% identity) | M.CfrA41ORFQP | |
| 619 | endonuclease | |||
| 1008 | Fis family transcriptional regulator | |||
| 1010 | M | M.CfrCF04ORFBP (100% identity) | ATGCAT | M.CfrA41ORFNP |
| 1011 | 108 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 123 | 125 aa hypothetical protein | |||
| 124 | R | restriction endonuclease | CfrA41MrrP | |
| 126 | Uncharacterised protein | |||