Vibrio parahaemolyticus FORC_022 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio parahaemolyticus FORC_022 RM systems
Ref: Lee,B. et al. unpublished
REBASE ref # 23192
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,358,191 bp | CP013248 |
| chromosome 2: | 1,879,955 bp | CP013249 |
REBASE acronym: Vpa22
Org_num: 21008
All begin FORC22_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 360 | 332 aa hypothetical protein | |||
| 361 | S | S.Vvu16ORF339P (100% identity) | S.Vpa22ORF362P | |
| 362 | M | M.Vvu16ORF339P (100% identity) | M.Vpa22ORF362P | |
| 363 | Multidrug and toxin extrusion (MATE) family | |||
| 364 | 428 aa hypothetical protein | |||
| 365 | R | Vvu16ORF339P (100% identity) | Vpa22ORF362P | |
| 366 | 385 aa hypothetical protein | |||
| chromosome 2 | ||||
| 3840 | Mrr restriction system protein | |||
| 3841 | R | VpaLVP1ORF2290P (99% identity) | Vpa22ORF3845P | |
| 3842 | S | S.Vsp1107ORF15190P (72% identity) | S.Vpa22ORF3845P | |
| 3843 | 565 aa hypothetical protein | |||
| 3844 | 291 aa hypothetical protein | |||
| 3845 | M | M.VpaLVP1ORF2290P (98% identity) | M.Vpa22ORF3845P | |
| 3846 | 471 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2778 | Ribulose-phosphate 3-epimerase | |||
| 2779 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa22DamP |
| 2780 | DamX, an inner membrane protein involved in bile | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 367 | 54 aa hypothetical protein | |||
| 368 | R | Vvu16MrrP (100% identity) | Vpa22MrrP | |
| 369 | Retron-type RNA-directed DNA polymerase | |||
| chromosome 2 | ||||
| 3839 | phage protein | |||
| 3840 | R | VpaBM26AMrrP (100% identity) | Vpa22Mrr2P | |
| 3841 | Type I restriction-modification system, | |||