Desulfovibrio piger isolate DESPIGER1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Desulfovibrio piger isolate DESPIGER1 RM systems
Ref: Wegmann,U. unpublished
REBASE ref # 11374
Complete sequence: 2,807,531 bp
GenBank #: LT630450
REBASE acronym: DpiD1
Org_num: 21159
All begin DESPIGER_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 942 | pertactin family virulence | |||
| 943 | M | M.Dpi32187ORFEP (91% identity) | M.DpiD1ORF943P | |
| 944 | S | S.PmeBin340ORFCP (34% identity) | S.DpiD1ORF943P | |
| 945 | R | Dpi32187ORFEP (97% identity) | DpiD1ORF943P | |
| 946 | DNA repair photolyase | |||
| 2492 | 81 aa hypothetical protein | |||
| 2493 | M | M.Ssp890ORFCP (61% identity) | M.DpiD1ORF2493P | |
| 2494 | Protein involved in cell division | |||
| 2495 | S | Type I restriction-modification system, | S1.DpiD1ORF2493P | |
| 2496 | S | Type I restriction-modification system, | S2.DpiD1ORF2493P | |
| 2497 | R | AspKB1ORF5505P (69% identity) | DpiD1ORF2493P | |
| 2498 | Nickel ABC transporter, periplasmic | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 28 | 54 aa hypothetical protein | |||
| ??? | M | M.PmeBin153ORFCP (46% identity) | M.DpiD1ORFBP | |
| 29 | 142 aa hypothetical protein | |||
| 191 | DNA modification | |||
| ??? | M | M2.Dpi32187ORFFP (81% identity) | M.DpiD1ORFAP | |
| 192 | Mobile element protein | |||
| 570 | COG0553: Superfamily II DNA/RNA helicases, SNF2 | |||
| 571 | RM | MspSO1ORF20809P (8% identity) | DpiD1ORF571P | |
| 572 | 389 aa hypothetical protein | |||