Salmonella enterica subsp. enterica serovar Newport CFSAN001660 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN001660 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 23154
Complete sequence: 4,833,991 bp
GenBank #: CP016010
REBASE acronym: SenN1660
Org_num: 20869
All begin A8179_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | Restriction endonuclease | |||
| 19955 | M | M2.SenS38AORF3430P (100% identity) | CCGANNNNNGTC | M.SenN1660ORF19955P |
| 19960 | integrase | |||
| 19965 | transposase | |||
| 19970 | S | S1.SenS38AORF3430P (100% identity) | CCGANNNNNGTC | S.SenN1660ORF19955P |
| 19975 | R | Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | SenN1660ORF19955P |
| 19980 | DUF91 domain-containing protein | |||
| 20205 | transcriptional regulator | |||
| 20210 | R | SenS38AORF3180P (100% identity) | TTACNNNNNTGC | SenN1660IIIP |
| 20215 | M | M.SenS38AORF3180P (100% identity) | TTACNNNNNTGC | M.SenN1660III |
| 20220 | S | S.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | S.SenN1660III |
| 20225 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1730 | cell division protein DamX | |||
| 1735 | M | M.StyTDamP (100% identity) | M.SenN1660DamP | |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 domain-containing protein | |||
| 2225 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenN1660II |
| 2230 | Fis family transcriptional regulator | |||
| 5405 | 146 aa hypothetical protein | |||
| 5410 | M | M.SenS38AORF18010P (100% identity) | M.SenN1660ORF5410P | |
| 5415 | 104 aa hypothetical protein | |||
| 5455 | GntR family transcriptional regulator | |||
| 5460 | M | M.SenS38AORF17955P (100% identity) | M.SenN1660ORF5460P | |
| 5465 | crossover junction endodeoxyribonuclease | |||
| 5695 | 75 aa hypothetical protein | |||
| 5700 | M | M.SenSL491ORF2393P (100% identity) | GATC | M.SenN1660ORF5700P |
| 5705 | endonuclease | |||
| 9220 | 157 aa hypothetical protein | |||
| 9225 | M | M.SenN1543ORF24750P (100% identity) | GATC | M.SenN1660ORF9225P |
| 9230 | crossover junction endodeoxyribonuclease | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.SenN1660DcmP |
| 9460 | V | V.StyTDcmP (100% identity) | V.SenN1660DcmP | |
| 9465 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17685 | 33 aa hypothetical protein | |||
| 17690 | R | Sens29927ORF17960P (99% identity) | CAGAG | SenN1660IP |
| 17695 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.SenN1660I |
| 17700 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | Type I restriction-modification protein subunit M | |||
| ??? | R | SenL1MrrP (100% identity) | SenN1660Mrr2P | |
| 19955 | DNA methyltransferase | |||