Haemophilus influenzae NML-Hia-1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Haemophilus influenzae NML-Hia-1 RM systems
Ref: Iskander,M. et al. unpublished
REBASE ref # 23418
Complete sequence: 1,829,217 bp
GenBank #: CP017811
REBASE acronym: HinHia1
Org_num: 20988
All begin BG256_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | oligopeptidase A | |||
| 3015 | M | M.Hin8730ORF8000P (100% identity) | GCANNNNNNNTAYG | M.HinHia1IV |
| 3020 | S | S2.Hin8730ORF8000P (65% identity) | GCANNNNNNNTAYG | S.HinHia1IV |
| 3025 | 176 aa hypothetical protein | |||
| 3030 | R | Hin8730ORF8000P (99% identity) | GCANNNNNNNTAYG | HinHia1IVP |
| 3035 | 209 aa hypothetical protein | |||
| 8580 | translation initiation factor IF-2 | |||
| 8585 | R | Hin8730ORF14820P (99% identity) | HinHia1ORF8610P | |
| 8590 | 77 aa hypothetical protein | |||
| 8595 | 76 aa hypothetical protein | |||
| 8600 | FRG domain-containing protein | |||
| 8605 | S | S.Hin8730ORF14820P (91% identity) | S.HinHia1ORF8610P | |
| 8610 | M | M.Hin8730ORF14820P (100% identity) | M.HinHia1ORF8610P | |
| 8615 | ribosome-binding factor A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 265 | aspartate-semialdehyde dehydrogenase | |||
| 270 | S | S.Hin8730ORF13880P (99% identity) | S.HinHia1ORF275P | |
| 275 | RM | Hin8730ORF13880P (100% identity) | HinHia1ORF275P | |
| 280 | tryptophan synthase subunit alpha | |||
| 510 | ASCH domain-containing protein | |||
| 515 | R | Hin8730ORF13360P (100% identity) | AAGCTT | HinHia1ORF520P |
| 520 | M | M.Hin8730ORF13360P (100% identity) | AAGCTT | M.HinHia1ORF520P |
| 525 | valine--tRNA ligase | |||
| 3120 | 39 aa hypothetical protein | |||
| 3125 | M | M.Hin8730ORF7830P (100% identity) | BA | M.HinHia1ORF3125P |
| 3130 | 148 aa hypothetical protein | |||
| 4545 | dicarboxylate transporter/tellurite-resistance | |||
| 4550 | R | Hin8730ORF4850P (100% identity) | GTYRAC | HinHia1IIP |
| 4555 | M | M.HinR548II (100% identity) | GTYRAC | M.HinHia1II |
| 4560 | DNA-directed RNA polymerase subunit beta | |||
| 6415 | HugZ family heme oxygenase | |||
| 6420 | M | M.Hin8730ORF1390P (99% identity) | GANTC | M.HinHia1I |
| 6425 | R | Hin8730ORF1390P (100% identity) | GANTC | HinHia1IP |
| 6430 | 115 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7485 | 113 aa hypothetical protein | |||
| 7490 | R | Hin25588ORFGP (100% identity) | ACAGC | HinHia1ORF7495P |
| ??? | M | M.Hin230ORF16190P (97% identity) | M.HinHia1ORF7495P | |
| 7505 | ribonuclease HII | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2980 | 3-dehydroquinate synthase | |||
| 2985 | M | M.HinGGDamP (100% identity) | GATC | M.HinHia1III |
| 2990 | phosphatidylglycerophosphatase | |||