Propionibacterium freudenreichii JS14 |
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Putative Propionibacterium freudenreichii JS14 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 22611
Complete sequence: 2,507,188 bp
GenBank #: LT593929
REBASE acronym: PfrJS14
Org_num: 20453
All begin PFR_JS14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 214 | DNA protecting protein DprA | |||
| 215 | R | PfrJS8IP (100% identity) | ATCNNNNNGTCG | PfrJS14IP |
| 216 | S | S.PfrJS8I (100% identity) | ATCNNNNNGTCG | S.PfrJS14I |
| ??? | M | M.PfrJS8I (100% identity) | ATCNNNNNGTCG | M.PfrJS14I |
| 219 | zinc-binding sorbitol dehydrogenase | |||
| 1996 | YbhF | |||
| 1997 | M | M.PfrP1ORF11000P (100% identity) | CAGNNNNNNCTG | M.PfrJS14III |
| ??? | S | S2.Pfr134ORF8885P (100% identity) | CAGNNNNNNCTG | S1.PfrJS14III |
| ??? | S | S2.Pfr19025ORF174P (98% identity) | S2.PfrJS14IIIP | |
| 2000 | R | Pfr516ORF9435P (99% identity) | CAGNNNNNNCTG | PfrJS14IIIP |
| 2001 | DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1882 | Carbohydrate kinase, PfkB family | |||
| 1883 | M | M.PfrPBF13ORFBP (100% identity) | CCWGG | M.PfrJS14II |
| 1884 | 703 aa Hypothetical protein | |||
| 2021 | 111 aa Hypothetical protein | |||
| 2022 | R | PfrUF1ORFAP (100% identity) | C | PfrJS14ORF2022P |
| 2023 | Uma4 protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1829 | Transporter, anaerobic C4-dicarboxylate uptake | |||
| 1830 | R | PfrTL19ORFBP (100% identity) | PfrJS14ORF1830P | |
| 1831 | 99 aa Hypothetical protein | |||
| 1858 | Protein of hypothetical function DUF299 | |||
| 1859 | R | PfrTL29Mrr3P (100% identity) | PfrJS14MrrP | |
| 1860 | MATE efflux family protein | |||