Propionibacterium freudenreichii JS8 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Propionibacterium freudenreichii JS8 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 22611
Complete sequence: 2,655,373 bp
GenBank #: LT576042
REBASE acronym: PfrJS8
Org_num: 20455
All begin PFR_JS8_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 239 | DNA protecting protein DprA | |||
| 240 | R | PfrJS7aIP (100% identity) | ATCNNNNNGTCG | PfrJS8IP |
| 241 | S | S.PfrJS7aI (100% identity) | ATCNNNNNGTCG | S.PfrJS8I |
| ??? | M | M.PfrJS7aI (100% identity) | ATCNNNNNGTCG | M.PfrJS8I |
| 244 | zinc-binding sorbitol dehydrogenase | |||
| 2156 | ABC transporter multidrug efflux pump, fused | |||
| ??? | M | M.PfrPBF13ORFFP (100% identity) | CAGNNNNNNRTCG | M.PfrJS8III |
| ??? | S | S.PfrPBF13ORFFP (100% identity) | CAGNNNNNNRTCG | S.PfrJS8III |
| 2159 | R | PfrPBF13ORFFP (100% identity) | CAGNNNNNNRTCG | PfrJS8IIIP |
| 2160 | PIN domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2012 | Carbohydrate kinase, PfkB family | |||
| 2013 | M | M.PfrPBF13ORFBP (100% identity) | CCWGG | M.PfrJS8II |
| 2014 | 703 aa Hypothetical protein | |||
| 2181 | 111 aa Hypothetical protein | |||
| 2182 | R | PfrUF1ORFAP (100% identity) | PfrJS8ORF2182P | |
| 2183 | 64 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1946 | PF07510 family protein | |||
| 1947 | R | PfrPBF04ORFBP (99% identity) | PfrJS8ORF1947P | |
| 1948 | 58 aa Hypothetical protein | |||
| 1987 | Protein of hypothetical function DUF299 | |||
| ??? | R | PfrTL29Mrr3P (100% identity) | PfrJS8MrrP | |
| 1989 | MATE efflux family protein | |||