Propionibacterium freudenreichii JS13 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Propionibacterium freudenreichii JS13 RM systems
Ref: Deptula,P.,Laine,P. et al. unpublished
REBASE ref # 22611
Complete sequence: 2,537,370 bp
GenBank #: LT618779
REBASE acronym: PfrJS13
Org_num: 20463
All begin PFR_JS13-1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 221 | 366 aa Hypothetical protein | |||
| 222 | R | PfrJS13aIP (100% identity) | ACCNNNNNCTTC | PfrJS13IP |
| 223 | S | S.PfrP19ORFDP (100% identity) | ACCNNNNNCTTC | S.PfrJS13I |
| ??? | M | M.PfrJS13aI (100% identity) | ACCNNNNNCTTC | M.PfrJS13I |
| 225 | 168 aa Hypothetical protein | |||
| 2033 | PltJ | |||
| 2034 | M | M.PfrJS13aII (100% identity) | GGANNNNNNNCTC | M.PfrJS13II |
| 2035 | S | S.PfrJS13aII (100% identity) | GGANNNNNNNCTC | S.PfrJS13II |
| ??? | R | PfrJS13aIIP (100% identity) | GGANNNNNNNCTC | PfrJS13IIP |
| 2037 | DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1918 | Carbohydrate kinase, PfkB family | |||
| 1919 | M | M.PfrPBF13ORFBP (100% identity) | CCWGG | M.PfrJS13III |
| 1920 | 703 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1865 | PF07510 family protein | |||
| 1866 | R | PfrJS13aORF1853P (100% identity) | PfrJS13ORF1866P | |
| 1867 | 99 aa Hypothetical protein | |||
| 1894 | Protein of hypothetical function DUF299 | |||
| 1895 | R | PfrTL29Mrr3P (100% identity) | PfrJS13MrrP | |
| 1896 | MATE efflux family protein | |||