Escherichia coli 3234/A |
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Putative Escherichia coli 3234/A RM systems
Ref: Leimbach,A. et al. unpublished
REBASE ref # 22656
Contig set: 5,482,981 bp
GenBank #: LCVH00000000 (NZ_LCVH00000000)
REBASE acronym: Eco3234A
Org_num: 20902
All begin EC3234A_108c, EC3234A_192c, EC3234A_195c, EC3234A_247c, EC3234A_271c, EC3234A_277c, EC3234A_27c, EC3234A_281c, EC3234A_285c, EC3234A_35c, EC3234A_47c, EC3234A_53c, EC3234A_57c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10 | M | M.Eco10C19ORF25195P (100% identity) | M.Eco3234AORF10P | |
| 10 | M | M.Eco10C19ORF25195P (100% identity) | M.Eco3234AORF10P | |
| 20 | 73 aa hypothetical protein | |||
| 330 | toxic peptide regulated by antisense sRNA symR | |||
| 340 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco3234AORF350P |
| 350 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco3234AORF350P |
| 360 | R | EcoN61ORF38010P (100% identity) | AACNNNNNNGTGC | Eco3234AORF350P |
| 370 | methylated adenine and cytosine restriction | |||
| 820 | DEAD/DEAH box helicase | |||
| 830 | S | S.EcoRG044ORF4250P (99% identity) | S.Eco3234AORF840P | |
| 840 | M | M.EcoRG044ORF4250P (99% identity) | M.Eco3234AORF840P | |
| 850 | R | Eco4282ORFDP (99% identity) | Eco3234AORF840P | |
| 860 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | DNA adenine methylase | M.Eco3234AORFBP | |
| 10 | 135 aa hypothetical protein | |||
| 40 | 73 aa hypothetical protein | |||
| 50 | M | M.EcoCO12ORF27880P (99% identity) | M.Eco3234AORF50P | |
| 60 | plasmid segregation actin-type ATPase ParM | |||
| 20 | 73 aa hypothetical protein | |||
| 30 | M | M.SflN92ORF24820P (99% identity) | M.Eco3234AORF30P | |
| 160 | P4 family phage/plasmid primase | |||
| 170 | R | SenB82ORF5360P (100% identity) | Eco3234AORF170P | |
| 180 | autotransporter outer membrane beta-barrel domain-containing protein | |||
| 200 | 298 aa hypothetical protein | |||
| 210 | M | M.EcoC9963ORF5465P (99% identity) | M.Eco3234AORF210P | |
| 220 | 73 aa hypothetical protein | |||
| 470 | D-ribulose-5-phosphate 3-epimerase | |||
| 480 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3234ADamP |
| 490 | cell division protein that binds to the septal | |||
| 620 | 65 aa hypothetical protein | |||
| ??? | M | DNA adenine methylase | M.Eco3234AORFAP | |
| 750 | tia invasion determinant | |||
| ??? | R | EcoRG044ORF4275P (99% identity) | GAAC | Eco3234AORF760P |
| 780 | 5-nucleotidase | |||
| 1370 | global DNA-binding transcriptional dual | |||
| 1380 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco3234AORF1380P |
| 1390 | membrane protein | |||
| 1570 | amino acid exporter for phenylalanine, | |||
| 1580 | V | V.SsoSE61DcmP (100% identity) | V.Eco3234ADcmP | |
| 1590 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco3234ADcmP |
| 1600 | HD superfamily phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 310 | R | SenHNK130McrCP (100% identity) | Eco3234AMcrCP | |
| 320 | R | Msa17McrB2P (100% identity) | Eco3234AMcrBP | |
| 330 | toxic peptide regulated by antisense sRNA symR | |||
| 360 | type I restriction-modification enzyme R | |||
| 370 | R | SenHNK130MrrP (100% identity) | Eco3234AMrrP | |
| 380 | GTP-binding protein, putative GTPase | |||