Escherichia coli 131/07 |
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Putative Escherichia coli 131/07 RM systems
Ref: Leimbach,A. et al. unpublished
REBASE ref # 22656
Contig set: 5,459,392 bp
GenBank #: JXUH00000000 (NZ_JXUH00000000)
REBASE acronym: Eco13107
Org_num: 20893
All begin EC13107_158c, EC13107_164c, EC13107_17c, EC13107_213c, EC13107_235c, EC13107_249c, EC13107_255c, EC13107_269c, EC13107_49c, EC13107_63c, EC13107_69c, EC13107_72c, ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10 | N-6 DNA methylase | |||
| 20 | S | S.Eco46ORF420P (99% identity) | S.Eco13107ORF10P | |
| 30 | ATP-dependent endonuclease (OLD family | |||
| 10 | M | M.Eco3234AORF30P (99% identity) | M.Eco13107ORF10P | |
| 20 | 73 aa hypothetical protein | |||
| 110 | 385 aa hypothetical protein | |||
| 120 | S | S.EcoC5ORF26620P (100% identity) | S.Eco13107ORF130P | |
| 130 | M | M.EcoC5ORF26620P (100% identity) | M.Eco13107ORF130P | |
| 140 | R | EcoJNUORF15575P (99% identity) | Eco13107ORF130P | |
| 150 | 82 aa hypothetical protein | |||
| 230 | methylated adenine and cytosine restriction | |||
| 240 | R | EcoN61ORF38010P (100% identity) | AACNNNNNNGTGC | Eco13107ORF250P |
| 250 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco13107ORF250P |
| 260 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco13107ORF250P |
| 270 | toxic peptide regulated by antisense sRNA symR | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10 | 251 aa hypothetical protein | |||
| 20 | M | M.EcosW25KORF26210P (97% identity) | M.Eco13107ORF20P | |
| 30 | 73 aa hypothetical protein | |||
| 1 | 74 aa hypothetical protein UH35_18045, partial | |||
| 2 | M | DNA adenine methylase | M.Eco13107ORFAP | |
| 20 | 73 aa hypothetical protein | |||
| 30 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco13107ORF30P | |
| 80 | DksA-type zinc finger protein | |||
| 90 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco13107ORF90P |
| 100 | phage replication protein | |||
| 100 | 65 aa hypothetical protein | |||
| ??? | M | DNA adenine methylase | M.Eco13107ORFBP | |
| 160 | P4 family phage/plasmid primase | |||
| 170 | R | SenB82ORF5360P (100% identity) | Eco13107ORF170P | |
| 180 | pseudogene | |||
| 470 | D-ribulose-5-phosphate 3-epimerase | |||
| 480 | M | DNA adenine methyltransferase | GATC | M.Eco13107DamP |
| 490 | cell division protein that binds to the septal | |||
| 430 | global DNA-binding transcriptional dual | |||
| 440 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco13107ORF440P |
| 450 | membrane protein | |||
| 1570 | amino acid exporter for phenylalanine, | |||
| 1580 | V | V.SsoSE61DcmP (100% identity) | V.Eco13107DcmP | |
| 1590 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco13107DcmP |
| 1600 | HD superfamily phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 220 | GTP-binding protein, putative GTPase | |||
| 230 | R | SenHNK130MrrP (100% identity) | Eco13107MrrP | |
| 240 | type I restriction-modification enzyme R | |||
| 270 | toxic peptide regulated by antisense sRNA symR | |||
| 280 | R | Msa17McrB2P (100% identity) | Eco13107McrBP | |
| 290 | R | SenHNK130McrCP (100% identity) | Eco13107McrCP | |