Methylomonas methanica R-45371 |
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Putative Methylomonas methanica R-45371 RM systems
Ref: Heylen,K. et al. unpublished
REBASE ref # 22630
Contig set: 5,482,877 bp
GenBank #: LUUH00000000 (NZ_LUUH00000000)
REBASE acronym: Mme45371
Org_num: 20956
All begin A1353_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 24635 | M | M.MspLW13ORFHP (24% identity) | M.Mme45371ORF24635P | |
| 24640 | R | MspLW13ORFHP (100% identity) | Mme45371ORF24635P | |
| ??? | S | S.MmoShm1ORF2965P (34% identity) | S.Mme45371ORF24820P | |
| 24825 | 235 aa hypothetical protein | |||
| 24520 | metal-dependent hydrolase | |||
| 24525 | R | Mme26612ORF8935P (97% identity) | Mme45371ORF24540P | |
| 24530 | 65 aa hypothetical protein | |||
| 24535 | 105 aa hypothetical protein | |||
| 24540 | M | M.Mme26612ORF8935P (56% identity) | M.Mme45371ORF24540P | |
| 24545 | transcription factor | |||
| ??? | M | M.Mme26612ORF7635P (54% identity) | M.Mme45371ORF5P | |
| 10 | 403 aa hypothetical protein | |||
| 15 | S | S.Mme45371ORF230P (90% identity) | S.Mme45371ORF5P | |
| 20 | histidine kinase | |||
| ??? | M | M.MspLW13ORFHP (55% identity) | M.Mme45371ORF60P | |
| 65 | 390 aa hypothetical protein | |||
| 70 | S | S.MspLW13ORFHP (100% identity) | S.Mme45371ORF60P | |
| 75 | 154 aa hypothetical protein | |||
| 8495 | R | Mme26612ORF7635P (97% identity) | Mme45371ORF8500P | |
| 8500 | M | M.Mme11130ORF8860P (96% identity) | M.Mme45371ORF8500P | |
| 8505 | 390 aa hypothetical protein | |||
| 8510 | S | S.Gsp3708ORF2327P (16% identity) | S.Mme45371ORF8500P | |
| 22355 | M | M.Mme26612ORF7935P (93% identity) | M.Mme45371ORF22355P | |
| 22360 | ATPase | |||
| 8485 | R | Mme26612ORF7635P (98% identity) | Mme45371ORF8490P | |
| 8490 | M | SAM-dependent methyltransferase | M.Mme45371ORF8490P | |
| 21040 | protoporphyrinogen oxidase | |||
| 21045 | R | MkoEYORF11900P (88% identity) | Mme45371ORF21050P | |
| 21050 | M | M.MkoEYORF11900P (93% identity) | M.Mme45371ORF21050P | |
| 21055 | DNA polymerase III subunit beta | |||
| 21060 | 116 aa hypothetical protein | |||
| 21065 | 343 aa hypothetical protein | |||
| 21070 | S | S.AspM932ORF9385P (27% identity) | S.Mme45371ORF21050P | |
| 215 | 325 aa hypothetical protein | |||
| 220 | S | S.Mme45371ORF5P (90% identity) | S.Mme45371ORF230P | |
| 225 | 403 aa hypothetical protein | |||
| 230 | M | M.MspLW13ORFHP (94% identity) | M.Mme45371ORF230P | |
| 235 | R | MspLW13ORFHP (96% identity) | Mme45371ORF230P | |
| 240 | DNA-binding protein HU | |||
| 290 | nuclease | |||
| 295 | R | MspEFPC2ORF19800P (81% identity) | Mme45371ORF300P | |
| 300 | M | M.MspEFPC2ORF19800P (86% identity) | M.Mme45371ORF300P | |
| 305 | S | S.Asp3207ORF3439P (28% identity) | S.Mme45371ORF300P | |
| 310 | 485 aa hypothetical protein | |||
| 23135 | 217 aa hypothetical protein | |||
| 23140 | M | M.Mle45370ORF7335P (90% identity) | M.Mme45371ORF23140P | |
| 23145 | S | S.NpaP5ORFDP (40% identity) | S.Mme45371ORF23140P | |
| 23150 | R | Mle45370ORF7335P (94% identity) | Mme45371ORF23140P | |
| 23155 | (p)ppGpp synthetase | |||
| 9090 | cytochrome P450 | |||
| 9095 | R | Pac3247ORF3790P (71% identity) | Mme45371ORF9110P | |
| 9100 | AbrB family transcriptional regulator | |||
| 9105 | twitching motility protein PilT | |||
| 9110 | M | M.ObaM01ORF22415P (79% identity) | M.Mme45371ORF9110P | |
| 9115 | 69 aa hypothetical protein | |||
| 9120 | 83 aa hypothetical protein | |||
| 9125 | S | S.Vpa43962ORFCP (40% identity) | S.Mme45371ORF9110P | |
| 9130 | MazF family transcriptional regulator | |||
| 16045 | fatty acid desaturase | |||
| 16050 | R | Mme26612ORF5695P (95% identity) | Mme45371ORF16080P | |
| 16055 | addiction module protein | |||
| 16060 | 158 aa hypothetical protein | |||
| 16065 | anticodon nuclease | |||
| 16070 | S | S.Mme26612ORF5695P (64% identity) | S.Mme45371ORF16080P | |
| 16075 | cell filamentation protein Fic | |||
| 16080 | M | M.Mme26612ORF5695P (99% identity) | M.Mme45371ORF16080P | |
| 16090 | phosphoribosyl-AMP cyclohydrolase | |||
| 17125 | DNA gyrase subunit B | |||
| 17130 | M | M1.Mko45378ORF20795P (97% identity) | M1.Mme45371ORF17130P | |
| 17135 | M | M2.Mko45383ORF14405P (95% identity) | M2.Mme45371ORF17130P | |
| 17140 | ATP-dependent DNA helicase RecG | |||
| 17145 | 138 aa hypothetical protein | |||
| 17150 | S | S.MmaS8ORF978P (39% identity) | S.Mme45371ORF17130P | |
| 17155 | R | Mko45383ORF14405P (97% identity) | Mme45371ORF17130P | |
| 10140 | DNA polymerase III subunit beta | |||
| 10145 | R | Mme26612ORF6625P (95% identity) | Mme45371ORF10145P | |
| 1595 | 90 aa hypothetical protein | |||
| 1600 | R | Psp53371ORFAP (85% identity) | Mme45371ORF1635P | |
| 1605 | 107 aa hypothetical protein | |||
| 1610 | nucleotidyltransferase | |||
| 1615 | toxin-antitoxin antitoxin component | |||
| 1620 | DNA polymerase subunit beta | |||
| 1625 | S | S.DzeWH1ORF600P (48% identity) | S.Mme45371ORF1635P | |
| 1630 | 141 aa hypothetical protein | |||
| 1635 | M | M.Mme26612ORF19195P (96% identity) | M.Mme45371ORF1635P | |
| 1645 | preprotein translocase subunit SecG | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23165 | 182 aa hypothetical protein | |||
| 23170 | M | M.MspEFPC1ORF22970P (86% identity) | M.Mme45371ORF23170P | |
| 23175 | 76 aa hypothetical protein | |||
| 18860 | 117 aa hypothetical protein | |||
| 18865 | M | M.MspEFPC1ORF22810P (90% identity) | M.Mme45371ORF18865P | |
| 18870 | 115 aa hypothetical protein | |||
| 185 | 224 aa hypothetical protein | |||
| 190 | M | M.PbaM84ORFBP (48% identity) | M.Mme45371ORF190P | |
| 195 | 315 aa hypothetical protein | |||
| 18510 | 290 aa hypothetical protein | |||
| 18515 | RM | Msp165ORF3370P (62% identity) | Mme45371ORF18515P | |
| 18520 | NgoFVII family restriction endonuclease | |||
| 14305 | helicase SNF2 | |||
| 14310 | RM | Mme11130ORF20310P (57% identity) | Mme45371ORF14310P | |
| 14315 | 663 aa hypothetical protein | |||
| 18985 | 404 aa hypothetical protein | |||
| ??? | M | M.MspEFPC1ORF22695P (89% identity) | GGCC | M.Mme45371ORFAP |
| 18990 | 185 aa hypothetical protein | |||
| 17515 | 255 aa hypothetical protein | |||
| 17520 | M | M.Mle45370ORF7485P (81% identity) | GTCGAC | M.Mme45371ORF17520P |
| 17525 | RNA helicase | |||
| 2300 | twitching motility protein PilT | |||
| 2305 | M | M.Msp202ORF24435P (89% identity) | M.Mme45371ORF2305P | |
| 2310 | 323 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22605 | 126 aa hypothetical protein | |||
| 22610 | R | TthARhD1MrrP (48% identity) | Mme45371MrrP | |
| 22615 | 79 aa hypothetical protein | |||
| 18505 | metallophosphoesterase | |||
| 18510 | R | CspIDOMrrP (64% identity) | Mme45371Mrr2P | |
| 18515 | 912 aa hypothetical protein | |||