Salmonella enterica subsp. enterica serovar Stanleyville CFSAN000624 SARB61 |
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Putative Salmonella enterica subsp. enterica serovar Stanleyville CFSAN000624 SARB61 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 22934
| Sequence length: | GenBank #: | |
| Chromosome: | 4,888,463 bp | CP017723 |
| plasmid pSARB26_01: | 106,449 bp | CP017724 |
| plasmid pSARB26_02: | 49,762 bp | CP017725 |
| plasmid pSARB26_03: | 58,302 bp | CP017726 |
REBASE acronym: Sen624
Org_num: 20799
All begin CFSAN000624_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19835 | restriction endonuclease | |||
| 19840 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen624IIP |
| 19845 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen624II |
| 19850 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen624II |
| 19855 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1750 | cell division protein DamX | |||
| 1755 | M | M.StyTDamP (100% identity) | GATC | M.Sen624DamP |
| 1760 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 domain-containing protein | |||
| 2245 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen624III |
| 2250 | Fis family transcriptional regulator | |||
| 3170 | 84 aa hypothetical protein | |||
| 3175 | M | M.SenSH7ORF3130P (100% identity) | GATC | M.Sen624ORF3175P |
| 3180 | 335 aa hypothetical protein | |||
| 6000 | 175 aa hypothetical protein | |||
| 6005 | M | M.Sen2206ORF6015P (100% identity) | M.Sen624ORF6005P | |
| 6010 | dTDP-6-deoxy-L-hexose 3-O-methyltransferase | |||
| 6595 | 59 aa hypothetical protein | |||
| 6600 | M | M.Sph9TCWORF31P (100% identity) | GATC | M.Sen624ORF6600P |
| 6605 | 355 aa hypothetical protein | |||
| 9450 | phosphohydrolase | |||
| 9455 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen624DcmP |
| 9460 | V | V.StyUK1DcmP (100% identity) | V.Sen624DcmP | |
| 9465 | drug/metabolite exporter YedA | |||
| 15435 | 101 aa hypothetical protein | |||
| 15440 | M | M.Ssp15303ORFAP (100% identity) | M.Sen624ORF15440P | |
| 15445 | 131 aa hypothetical protein | |||
| 21060 | transposase | |||
| 21065 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Sen624ORF21070P |
| ??? | M | M.EcoHK31IB (100% identity) | YGGCCR | M.Sen624ORF21070P |
| 21075 | 74 aa hypothetical protein | |||
| plasmid pSARB26_01 | ||||
| 23925 | 76 aa hypothetical protein | |||
| 23930 | M | M.SphSSU5ORF88P (96% identity) | GATC | M.Sen624ORF23930P |
| 23935 | 280 aa hypothetical protein | |||
| plasmid pSARB26_02 | ||||
| 24520 | 198 aa hypothetical protein | |||
| 24525 | R | Ubap201ORF4P (100% identity) | CCWGG | Sen624ORF24530P |
| 24530 | M | M.Ubap201ORF4P (100% identity) | CCWGG | M.Sen624ORF24530P |
| 24535 | transposase | |||
| plasmid pSARB26_03 | ||||
| 24865 | plasmid stabilization protein | |||
| 24870 | M | M.Ecoi10bORF4886P (100% identity) | M.Sen624ORF24870P | |
| 24875 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17620 | 33 aa hypothetical protein | |||
| 17625 | R | SenS133ORF17655P (99% identity) | CAGAG | Sen624IP |
| 17630 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen624I |
| 17635 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19830 | 95 aa hypothetical protein | |||
| 19835 | R | StyUK1MrrP (100% identity) | Sen624MrrP | |
| 19840 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5930 | 0 aa hypothetical protein | |||
| 5935 | M | M.StyTORF1926P (97% identity) | GATC | M.Sen624ORF5935P |
| 5940 | 354 aa hypothetical protein | |||