Escherichia coli O157:H7 2159 |
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Putative Escherichia coli O157:H7 2159 RM systems
Ref: Bono,J.L. and Arthur,T.M. unpublished
REBASE ref # 22851
| Sequence length: | GenBank #: | |
| Chromosome: | 5,416,633 bp | CP017438 |
| plasmid pO157: | 92,596 bp | CP017439 |
REBASE acronym: Eco2159
Org_num: 20485
All begin A4C45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24320 | 94 aa hypothetical protein | |||
| 24325 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco2159IP |
| 24330 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco2159I |
| 24335 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco2159I |
| 24340 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2370 | cell division protein DamX | |||
| 2375 | M | DNA adenine methylase | GATC | M.Eco2159DamP |
| 2380 | ribulose-phosphate 3-epimerase | |||
| 2905 | DUF2556 domain-containing protein | |||
| 2910 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco2159ORF2910P |
| 2915 | Fis family transcriptional regulator | |||
| 9860 | ninB protein | |||
| 9865 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco2159ORF9865P |
| 9870 | protein ninE | |||
| 10710 | phosphohydrolase | |||
| 10715 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco2159Dcm |
| 10720 | V | V.EcosPA8DcmP (100% identity) | V.Eco2159DcmP | |
| 10725 | drug/metabolite exporter YedA | |||
| 15220 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 15235 | M | M.EcoNE92ORF14960P (100% identity) | M.Eco2159ORF15235P | |
| 15240 | TrmB family transcriptional regulator | |||
| 22585 | transposase | |||
| 22590 | M | M.Ecos32ORF15460P (100% identity) | GCCGGC | M.Eco2159ORF22590P |
| ??? | R | Ecos32ORF15460P (100% identity) | GCCGGC | Eco2159ORF22590P |
| 22600 | glutamate-5-semialdehyde dehydrogenase | |||
| 24600 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco2159II |
| 24605 | helicase | |||
| plasmid pO157 | ||||
| 27955 | 101 aa hypothetical protein | |||
| 27960 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco2159ORF27960P | |
| 27965 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24340 | 113 aa hypothetical protein | |||
| ??? | R | EcoX21GmrDP (100% identity) | Eco2159GmrDP | |
| 24350 | 293 aa hypothetical protein | |||