Ref: Khaleque,H.N. et al. unpublished

REBASE ref # 23427

Sequence length:GenBank #:
Chromosome: 3,363,634 bp CP017448
plasmid pAPV6: 162,484 bp CP017449

REBASE acronym: AprV6

Org_num: 20647

 

All begin BJI67_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
3525 ISL3 family transposase
3530 R DdeGORF2868P (98% identity) AprV6ORF3540P
3535 S S.AfaJQ135ORF12300P (63% identity) S.AprV6ORF3540P
3540 M M.Spu10738II (98% identity) M.AprV6ORF3540P
3545 transposase
 
6520 110 aa hypothetical protein
6525 M M.AfeV8ORF8375P (94% identity) M.AprV6ORF6525P
6530 S S.MspCANORF6640P (37% identity) S.AprV6ORF6525P
6535 101 aa hypothetical protein
6540 208 aa hypothetical protein
6545 233 aa hypothetical protein
6550 108 aa hypothetical protein
6555 R AfeV8ORF8375P (99% identity) AprV6ORF6525P
6560 59 aa hypothetical protein
 
9340 286 aa hypothetical protein
9345 R AprF5ORF6130P (88% identity) AprV6ORF9355P
9350 S S.MmaA45ORFEP (37% identity) S.AprV6ORF9355P
9355 M M.Dco13527V (71% identity) M.AprV6ORF9355P
9360 123 aa hypothetical protein
 
12960 69 aa hypothetical protein
12965 R Msp95ORFAP (89% identity) AprV6ORF12985P
12970 190 aa hypothetical protein
12975 S S.Psp319ORF50P (35% identity) S1.AprV6ORF12985P
12980 S S2.HalAW7ORFAP (83% identity) S2.AprV6ORF12985P
12985 M M.Mpe15528ORFDP (86% identity) M.AprV6ORF12985P
12990 integrase
 
14605 429 aa hypothetical protein
14610 R AfeV8ORF740P (86% identity) CCAANNNNNNTTG AprV6ORF14630P
14615 70 aa hypothetical protein
14620 cell filamentation protein Fic
14625 S S.TspCT3ORF5750P (43% identity) CCAANNNNNNTTG S.AprV6ORF14630P
14630 M M.AfeV8ORF740P (92% identity) CCAANNNNNNTTG M.AprV6ORF14630P
14635 379 aa hypothetical protein
 
plasmid pAPV6
 
15740 transposase
15745 R AspSY39ORF3810P (89% identity) AprV6ORF15765P
15750 77 aa hypothetical protein
15755 327 aa hypothetical protein
15760 S S.RspA2ORFD1P (38% identity) S.AprV6ORF15765P
15765 M M.AspSY39ORF3810P (91% identity) M.AprV6ORF15765P
15770 452 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
2340 group II intron reverse transcriptase/maturase
??? R Nwe12742ORF1189P (45% identity) AprV6ORFAP
??? M M.Dma2077ORF17060P (83% identity) CAGCTG M.AprV6ORFAP
2345 cupin
 
12850 221 aa hypothetical protein
12855 RM Tpr5130ORF975P (100% identity) AprV6ORF12855P
12860 182 aa hypothetical protein
 
12925 71 aa hypothetical protein
12930 R Afe5721ORF20293P (84% identity) CCWGG AprV6ORF12940P
12935 V V.RsoRSCMORF3290P (70% identity) V.AprV6ORF12940P
12940 M M.Pno1341ORFDP (70% identity) CCWGG M.AprV6ORF12940P
12945 99 aa hypothetical protein
 
15115 phosphoglucomutase
15120 R NurNm10ORF1235P (74% identity) AprV6ORF15125P
15125 M M.MspEFPC2ORF14345P (73% identity) RGATCY M.AprV6ORF15125P
15130 acetylglutamate kinase
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
6610 64 aa hypothetical protein
6615 M M.AspNLS2ORF2695P (67% identity) M.AprV6ORF6615P
6620 type III restriction endonuclease subunit R
 
6615 DNA methylase
6620 R Kgl21IIIP (85% identity) AprV6ORF6620P
6625 integrase
 
plasmid pAPV6
 
16010 195 aa hypothetical protein
16015 M M.TspPSB1ORF22745P (64% identity) M.AprV6ORF16015P
16020 93 aa hypothetical protein
16025 74 aa hypothetical protein
16030 R AtuF2ORF200239P (72% identity) AprV6ORF16015P
16035 450 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
1360 426 aa hypothetical protein
1365 R Hsp522MrrP (63% identity) AprV6MrrP
1370 GNAT family N-acetyltransferase