Acidihalobacter prosperus V6 |
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Putative Acidihalobacter prosperus V6 RM systems
Ref: Khaleque,H.N. et al. unpublished
REBASE ref # 23427
| Sequence length: | GenBank #: | |
| Chromosome: | 3,363,634 bp | CP017448 |
| plasmid pAPV6: | 162,484 bp | CP017449 |
REBASE acronym: AprV6
Org_num: 20647
All begin BJI67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3525 | ISL3 family transposase | |||
| 3530 | R | DdeGORF2868P (98% identity) | AprV6ORF3540P | |
| 3535 | S | S.AfaJQ135ORF12300P (63% identity) | S.AprV6ORF3540P | |
| 3540 | M | M.Spu10738II (98% identity) | M.AprV6ORF3540P | |
| 3545 | transposase | |||
| 6520 | 110 aa hypothetical protein | |||
| 6525 | M | M.AfeV8ORF8375P (94% identity) | M.AprV6ORF6525P | |
| 6530 | S | S.MspCANORF6640P (37% identity) | S.AprV6ORF6525P | |
| 6535 | 101 aa hypothetical protein | |||
| 6540 | 208 aa hypothetical protein | |||
| 6545 | 233 aa hypothetical protein | |||
| 6550 | 108 aa hypothetical protein | |||
| 6555 | R | AfeV8ORF8375P (99% identity) | AprV6ORF6525P | |
| 6560 | 59 aa hypothetical protein | |||
| 9340 | 286 aa hypothetical protein | |||
| 9345 | R | AprF5ORF6130P (88% identity) | AprV6ORF9355P | |
| 9350 | S | S1.MmaMR1ORF3405P (37% identity) | S.AprV6ORF9355P | |
| 9355 | M | M.Dco13527V (71% identity) | M.AprV6ORF9355P | |
| 9360 | 123 aa hypothetical protein | |||
| 12960 | 69 aa hypothetical protein | |||
| 12965 | R | Msp95ORFAP (89% identity) | AprV6ORF12985P | |
| 12970 | 190 aa hypothetical protein | |||
| 12975 | S | S.Psp319ORF50P (35% identity) | S1.AprV6ORF12985P | |
| 12980 | S | S2.HalAW7ORFAP (83% identity) | S2.AprV6ORF12985P | |
| 12985 | M | M.Mpe15528ORFDP (86% identity) | M.AprV6ORF12985P | |
| 12990 | integrase | |||
| 14605 | 429 aa hypothetical protein | |||
| 14610 | R | AfeV8ORF740P (85% identity) | CCAANNNNNNTTG | AprV6ORF14630P |
| 14615 | 70 aa hypothetical protein | |||
| 14620 | cell filamentation protein Fic | |||
| 14625 | S | S.TspCT3ORF5750P (43% identity) | CCAANNNNNNTTG | S.AprV6ORF14630P |
| 14630 | M | M.AfeV8ORF740P (92% identity) | CCAANNNNNNTTG | M.AprV6ORF14630P |
| 14635 | 379 aa hypothetical protein | |||
| plasmid pAPV6 | ||||
| 15740 | transposase | |||
| 15745 | R | AspSY39ORF3810P (89% identity) | AprV6ORF15765P | |
| 15750 | 77 aa hypothetical protein | |||
| 15755 | 327 aa hypothetical protein | |||
| 15760 | S | S.RspA2ORFD1P (38% identity) | S.AprV6ORF15765P | |
| 15765 | M | M.AspSY39ORF3810P (91% identity) | M.AprV6ORF15765P | |
| 15770 | 452 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2340 | group II intron reverse transcriptase/maturase | |||
| ??? | R | Nwe12742ORF1189P (45% identity) | AprV6ORFAP | |
| ??? | M | M.Dma2077ORF17060P (83% identity) | CAGCTG | M.AprV6ORFAP |
| 2345 | cupin | |||
| 12850 | 221 aa hypothetical protein | |||
| 12855 | RM | Tpr5130ORF975P (100% identity) | AprV6ORF12855P | |
| 12860 | 182 aa hypothetical protein | |||
| 12925 | 71 aa hypothetical protein | |||
| 12930 | R | Afe5721ORF20293P (84% identity) | CCWGG | AprV6ORF12940P |
| 12935 | V | V.RsoRSCMORF3290P (70% identity) | V.AprV6ORF12940P | |
| 12940 | M | M.Pno1341ORFDP (70% identity) | CCWGG | M.AprV6ORF12940P |
| 12945 | 99 aa hypothetical protein | |||
| 15115 | phosphoglucomutase | |||
| 15120 | R | NurNm10ORF1235P (74% identity) | AprV6ORF15125P | |
| 15125 | M | M.MspEFPC2ORF14345P (73% identity) | RGATCY | M.AprV6ORF15125P |
| 15130 | acetylglutamate kinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6610 | 64 aa hypothetical protein | |||
| 6615 | M | M.AspNLS2ORF2695P (67% identity) | M.AprV6ORF6615P | |
| 6620 | type III restriction endonuclease subunit R | |||
| 6615 | DNA methylase | |||
| 6620 | R | Kgl21IIIP (85% identity) | AprV6ORF6620P | |
| 6625 | integrase | |||
| plasmid pAPV6 | ||||
| 16010 | 195 aa hypothetical protein | |||
| 16015 | M | M.TlaWSORF10020P (50% identity) | M.AprV6ORF16015P | |
| 16020 | 93 aa hypothetical protein | |||
| 16025 | 74 aa hypothetical protein | |||
| 16030 | R | SspWSD51ORFAP (71% identity) | AprV6ORF16015P | |
| 16035 | 450 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1360 | 426 aa hypothetical protein | |||
| 1365 | R | Hsp522MrrP (63% identity) | AprV6MrrP | |
| 1370 | GNAT family N-acetyltransferase | |||