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Putative Xanthomonas oryzae pv. oryzae PXO563 RM systems
Ref: Quibod,I.L. and Oliva,R. unpublished
REBASE ref # 22872
Complete sequence: 4,936,308 bp
GenBank #: CP013678
REBASE acronym: Xor563
Org_num: 20548
All begin ATY48_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
16980 | 88 aa hypothetical protein | |||
16985 | R | XorPXO61ORF18385P (100% identity) | Xor563ORF17020P | |
16990 | 224 aa hypothetical protein | |||
16995 | 248 aa hypothetical protein | |||
??? | S | S.XorMORF3262AP (100% identity) | S1.Xor563ORF17020P | |
17005 | transposase | |||
17010 | S | S.XorPXO61ORF18385P (20% identity) | S2.Xor563ORF17020P | |
17015 | 144 aa hypothetical protein | |||
17020 | M | M.XorPXO61ORF18385P (100% identity) | M.Xor563ORF17020P | |
17025 | restriction endonuclease | |||
17035 | pseudogene | |||
17040 | R | XorYN10ORF7750P (100% identity) | Xor563ORF17050P | |
17045 | abortive infection protein | |||
17050 | M | M.XorO341ORF7180P (100% identity) | M.Xor563ORF17050P | |
17055 | S | S.XorN37ORF18125P (100% identity) | S.Xor563ORF17050P | |
17060 | plasmid stabilization protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
2830 | 194 aa hypothetical protein | |||
2835 | V | V.XorPXO61ORF3170P (100% identity) | V.Xor563ORF2840P | |
??? | M | M.XorN37ORF3120P (100% identity) | CGATCG | M.Xor563ORF2840P |
2845 | R | XorPXO61ORF3170P (100% identity) | CGATCG | Xor563ORF2840P |
2850 | integrase | |||
19445 | tail-specific protease | |||
??? | R | XorPX061IP (100% identity) | CTGCAG | Xor563ORF19455P |
??? | M | M.XorYC11ORF20530P (100% identity) | CTGCAG | M.Xor563ORF19455P |
19460 | lipoyl synthase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
20750 | addiction module protein | |||
20755 | M | M.XorZ173ORF2630P (100% identity) | CCGAGG | M.Xor563ORF20755P |
20760 | R | XorYcbORF21955P (100% identity) | CCGAGG | Xor563ORF20755P |
20765 | alpha/beta hydrolase | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
17020 | N-6 DNA methylase | |||
??? | R | XorZ173MrrP (100% identity) | Xor563MrrP | |
17030 | plasmid stabilization protein |